Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g0186 ATGATGGGGAGGGACAAAATGACGAAGAACAACAATATCAGTAATGTTAATAAGAGCAAGCTGAGGAAAGGGCTGTGGTCGCCAGAGGAAGACGAGAAGCTGATAAGGTACATGTTGACGAATGGACAAGGTTGTTGGAGTGACATTGCCAGAAACGCCGGACTTCTTCGCTGTGGCAAAAGTTGTCGTCTTCGTTGGATCAATTACCTCAGACCTGACCTCAAACGTGGTGCCTTTTCCCCTCATGAAGAACACCTCATCATTCATCTTCACTCTCTTCTTGGCAACAGATGGTCTCAGATTGCTGCACGTCTTCCTGGGAGAACTGACAACGAGATTAAGAATTTCTGGAACTCTACATTGAAGAAAAGGTTCAAAAATAACAACAACAATTCCTCATCTCCATCACCAAACAACTCATCACCGTCGATGACATCCTCTTCATCAGAACCTAAAAACCATGCCTTCATCAGTGGGAACTCAAGTATGATCATCGACCCATTAATGCCCACATCATCATCGTCCTTGTCCACCATGCAAGTCCCTATCATTTTCGGAGATCAGTTAGCTTCCGACAGTACCTTTTTCCCATTGAATCATCATCATCATCTTGACATGAACAATATTGAAGGAGCTGGTAATTTACCTTTATTAACCGCTGCAGAAGTTGGCAACATAGAAGAAGGGCTTTACAATAATGGAGATTATGGGACAATATTACTAGATTCTAGTGATATTGGGGACAATAAAAATAGGGTCCCAAATTTCGATGATGTTATTAGTGTGAAAAGCCACTACAACAACTTCAACAATAGTTGCTTCAATTACACTAATGATCATCATCATCAAATAATTCATCAGAGCTCATCAAGTAAAGTAGATCAGGGTTTGTTTGGGTTTGGAAATAGCAATAAGATCATCAGTAATGAGCACTTAGCAGTGGGAGATCAATGGGATTTGGAAGGTCTGATGCAAGACATGTCTTCTTTTCCCTTCCATGATTTTTCCAAGTTGGCTTAG 1020 0.4108 MMGRDKMTKNNNISNVNKSKLRKGLWSPEEDEKLIRYMLTNGQGCWSDIARNAGLLRCGKSCRLRWINYLRPDLKRGAFSPHEEHLIIHLHSLLGNRWSQIAARLPGRTDNEIKNFWNSTLKKRFKNNNNNSSSPSPNNSSPSMTSSSSEPKNHAFISGNSSMIIDPLMPTSSSSLSTMQVPIIFGDQLASDSTFFPLNHHHHLDMNNIEGAGNLPLLTAAEVGNIEEGLYNNGDYGTILLDSSDIGDNKNRVPNFDDVISVKSHYNNFNNSCFNYTNDHHHQIIHQSSSSKVDQGLFGFGNSNKIISNEHLAVGDQWDLEGLMQDMSSFPFHDFSKLA 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g0186 339 SUPERFAMILY Homeodomain-like 21 117 IPR009057 -
Lele31g0186 339 FunFam Myb transcription factor 78 125 - -
Lele31g0186 339 Pfam Myb-like DNA-binding domain 76 120 IPR001005 -
Lele31g0186 339 Pfam Myb-like DNA-binding domain 23 70 IPR001005 -
Lele31g0186 339 Gene3D - 20 76 - -
Lele31g0186 339 CDD SANT 26 70 IPR001005 -
Lele31g0186 339 FunFam MYB transcription factor 20 76 - -
Lele31g0186 339 Gene3D - 77 150 - -
Lele31g0186 339 PANTHER MYB DOMAIN PROTEIN 55 15 300 - -
Lele31g0186 339 SMART sant 22 72 IPR001005 -
Lele31g0186 339 SMART sant 75 123 IPR001005 -
Lele31g0186 339 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 18 70 IPR017930 -
Lele31g0186 339 MobiDBLite consensus disorder prediction 124 153 - -
Lele31g0186 339 CDD SANT 78 121 IPR001005 -
Lele31g0186 339 ProSiteProfiles Myb-like domain profile. 71 121 IPR001005 -
Lele31g0186 339 ProSiteProfiles Myb-like domain profile. 18 70 IPR001005 -
Lele31g0186 339 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 71 125 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g0186 Lele-ChrLele31 1826075 1827844 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g0186 4 335 MYB Transcription Factor Family AT3G08500 49.284 1.67e-78 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele31g0186 Myb_DNA-binding 7.9e-13 CL0123