Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g0184 ATGGTAGTAACAACAATCATGACACACAAATCCTCGTTTGTTCTCTCATCCTTCTTCCACTTTCTCTCCTTACTTATTGCAGCCCATGCAACAAGCTTTAGCTCAATAATACTAAATCCATCTCCAAGACGAACACTACAACAAGAAAACGGTGTTTTTCTTGCAGAACAAAACTCAGAGTCGCCTGATTATCGGTATGCGTGTTTGGACCAAAGTGGTGTAGCTCCATCAAGCAAATACCAAAGCAATCTCAATAGTCTCATATCTTCCCTTTCTTCTGATGCTTCAACCAGCAGTGGGTTTGGTAACAGAACTGCAGGTAGTGATGAAGATATGGTGTTTGGGCTTTATCTTTGTAGAGGGGATGTGAATTTAAGTTTGTGTCATTCATGTGTTCAAGATTCTAGCAGATTGATTAAACAATATTGTCCCAACAATGCTACTGCGGTTTTATGGTACCCAATTTGCCTTCTCAGGTACTCAAACCAGAATTTCATCGGCGATCTAACGCTAAGGCCTCGGATTCCCATGTTCGATGCATCGCAAAACTTCACAAGTGCAGGAGAGTTTGATAGTGACGCTAGGATTCTGATGAACGGTTTGATACAGACAGTTTCAGAGACAAACCTACTGTTTGGGACACATGTGTTCAACATAAATGGTACCCAGAAAAGGTATGGTTGGGTTCAGTGCAGCAGAGACATAACCAGTGAAGAGTGCAGAACATGTCTGAGCAATATGCTTGAAGATGTTGAGAATTGCTGTGAAGGCAAGAGGGTTTGGAGAGTCTTTTCTCCTAGTTGTGTTGTCATGTATGAGACTCAGCCTTTCTTTGTAAATAACACTGGGTTGATTACTCCAACATCCCAGCCAGGTGAGGAAAGTAGTAACAGGTCAATGCTTATAGTCATCATCGTTATAAGTGTAGTAGTAGTAGTACTAGCTCTGCTGGTTTTCTGCAAAATCTACTTCAGGTTCTTGAGAAAGAAAAAAGACAAACAAGCAGTGAAGGAAGAAGGGCTAAATCCAGTATTTTCTCAAGACCAAACTGACCAAGAGAATGCTATGAGCGCTGACCTTCCTATAATGTCCCTGAAAACTATTCTTGAAACTACTTGTAACTTCTCTGATGAGTATAAATTGGGAAAAGGCGGATTTGGCTCTGTTTACAAGGGTGTTTTACCTGATGGGAAGGAAATAGCAGTAAAAAGGCTGTCAAAAACTTCAGGGCAAGGATTAAAAGAGTTCAAGAATGAAGTGATATTGATTGCAAAATTGCAGCATCGGAACCTTGTGAGATTACTAGCCTGTTGTATCGAACAAAATGAAAAGCTACTTGTTTATGAGTACATGCCTAATTCGAGCCTCGATTTTCACCTCTTCAATATAGAGAAGCGTTCTAATTTGGAATGGAATCTGCGATTGAGTATTATTTATGGAATTGCAAAAGGACTTTTATATCTCCATGAAGACTCTAGACTAAGGGTTATTCATAGGGATCTAAAAGCTAGTAATATATTATTAGATCATGAAATGAATCCAAAAATTTCGGATTTTGGATTAGCAAGAGCTTTTGGAGGCAACCAAAGGGAAGCAAATACTATTAGAGTTGTGGGTACCTATGGTTACATGGCTCCAGAATATGCTATGGAAGGCTTATTTTCAGTAAAATCTGATGTTTTTAGCTTTGGTGTTCTTCTACTAGAAATCATTAGTGGGAAAAAGAATAGTGGGTTCTATCTTTCAGAACTTGGACAAAGCCTTCTCATATATGCATGGAGGCTGTGGAGTGAAGGGAAGGGCTTGGAGCTGATGGATCCAATACTAGAAAGTTCATTTGAACCTTCTGAAGTTCTCAAGTGTATCCACATAGGCCTCCTATGTGTGCAAGAAGATGCAGCAGACAGACCAACAATGTCAAGTGTGGTACTTACGCTTGCAAGTGACTCAGGGAACCTTCCAAGGCCAACACAACCTGCATTTTCTGTTGGAAGAAGTTTCATGGAGAACGCGTCCATTAATGGAGTAACTATTTCTGAAGTTGGAGCTAGATGA 2055 0.401 MVVTTIMTHKSSFVLSSFFHFLSLLIAAHATSFSSIILNPSPRRTLQQENGVFLAEQNSESPDYRYACLDQSGVAPSSKYQSNLNSLISSLSSDASTSSGFGNRTAGSDEDMVFGLYLCRGDVNLSLCHSCVQDSSRLIKQYCPNNATAVLWYPICLLRYSNQNFIGDLTLRPRIPMFDASQNFTSAGEFDSDARILMNGLIQTVSETNLLFGTHVFNINGTQKRYGWVQCSRDITSEECRTCLSNMLEDVENCCEGKRVWRVFSPSCVVMYETQPFFVNNTGLITPTSQPGEESSNRSMLIVIIVISVVVVVLALLVFCKIYFRFLRKKKDKQAVKEEGLNPVFSQDQTDQENAMSADLPIMSLKTILETTCNFSDEYKLGKGGFGSVYKGVLPDGKEIAVKRLSKTSGQGLKEFKNEVILIAKLQHRNLVRLLACCIEQNEKLLVYEYMPNSSLDFHLFNIEKRSNLEWNLRLSIIYGIAKGLLYLHEDSRLRVIHRDLKASNILLDHEMNPKISDFGLARAFGGNQREANTIRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVLLLEIISGKKNSGFYLSELGQSLLIYAWRLWSEGKGLELMDPILESSFEPSEVLKCIHIGLLCVQEDAADRPTMSSVVLTLASDSGNLPRPTQPAFSVGRSFMENASINGVTISEVGAR 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g0184 684 FunFam Liguleless narrow1 451 654 - -
Lele31g0184 684 FunFam Cysteine-rich receptor-like protein kinase 10 175 277 - -
Lele31g0184 684 FunFam Cysteine-rich receptor-like protein kinase 28 64 164 - -
Lele31g0184 684 SMART serkin_6 375 648 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele31g0184 684 SUPERFAMILY Protein kinase-like (PK-like) 360 660 IPR011009 -
Lele31g0184 684 ProSiteProfiles Gnk2-homologous domain profile. 62 165 IPR002902 -
Lele31g0184 684 Pfam Salt stress response/antifungal 74 163 IPR002902 -
Lele31g0184 684 Pfam Salt stress response/antifungal 182 274 IPR002902 -
Lele31g0184 684 Gene3D Transferase(Phosphotransferase) domain 1 451 653 - -
Lele31g0184 684 ProSitePatterns Protein kinases ATP-binding region signature. 381 403 IPR017441 GO:0005524
Lele31g0184 684 ProSitePatterns Serine/Threonine protein kinases active-site signature. 496 508 IPR008271 GO:0004672|GO:0006468
Lele31g0184 684 Gene3D - 176 277 IPR038408 -
Lele31g0184 684 Gene3D - 62 165 IPR038408 -
Lele31g0184 684 ProSiteProfiles Protein kinase domain profile. 375 661 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele31g0184 684 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 342 450 - -
Lele31g0184 684 Pfam Protein tyrosine and serine/threonine kinase 379 644 IPR001245 GO:0004672|GO:0006468
Lele31g0184 684 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 71 665 - -
Lele31g0184 684 Gene3D Phosphorylase Kinase; domain 1 337 450 - -
Lele31g0184 684 CDD STKc_IRAK 381 646 - -
Lele31g0184 684 ProSiteProfiles Gnk2-homologous domain profile. 172 277 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g0184 Lele-ChrLele31 1804221 1808686 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g0184 59 661 Receptor kinase-like Gene Family AT4G05200 42.190 1.11e-171 505
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele31g0184 PK_Tyr_Ser-Thr 9.3e-47 CL0016