Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g0179 ATGTGTATGTTGCTAGGTTTTTGGATTGTTGAAGCTACCTCGCACTGCATTCTGTTGAATTCGAAAGAGCTTGACCGTGTGCATTACATAGATACGGGATTTCCTTATACTGTTACTGAAAGCTTCATGGACTTCTTTGAAGGGTTCACGTATGTGCCAGCTAATTGTCTTCACAACGGATCCGTGCCTGATCAGGAAAGTGCCAACTGGATGATGAATATGAGCCCATACAAATACGACATGTCTGGCCCTTTTTGTCCATCTTATTTTGGTTATCCTGAATATATCCTTCCCTTACCAAGGATGGAGGTCAACAGAGGACAGTGGGAAAGCCCTTCAACAATGACGATTGAGGAGCCTGCCACAACAGACTCTCTGTCCAGAAGCGATGGAGTCGCTGGCATGCAGACTATTCCTGAAGAATGTTGCCCTAACCATCAAGATTCCCCTGGTACTCAGGTTGTATGGCAGCAAGACAGCATAGATCCTGATAATATGACTTATGAGGAATTACTGGACTTGAGTGAGGCAGTTGGAACTCAAAGCAGAGGCCTTTGCAAAGAACTTATTGATTTGCTTCCTGTCTCAAAGTACAATCTTAAAAGCATGTTTAAAAGAAAAAACTATGGGAAAAGGTGTGTGATTTGTCAGATGACATACAGAAGAGGTGACCAACAAATGAAATTGCCATGCACGCATGTTTACCATAGTGAATGCATCTCCAAATGGCTTAGCATTAACAAGAAGTGCCCAGTTTGCAACACTGAGGTGTTTGGCGAGGATTCAAGGAATTAG 795 0.4302 MCMLLGFWIVEATSHCILLNSKELDRVHYIDTGFPYTVTESFMDFFEGFTYVPANCLHNGSVPDQESANWMMNMSPYKYDMSGPFCPSYFGYPEYILPLPRMEVNRGQWESPSTMTIEEPATTDSLSRSDGVAGMQTIPEECCPNHQDSPGTQVVWQQDSIDPDNMTYEELLDLSEAVGTQSRGLCKELIDLLPVSKYNLKSMFKRKNYGKRCVICQMTYRRGDQQMKLPCTHVYHSECISKWLSINKKCPVCNTEVFGEDSRN 264
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele31g0179 264 ProSiteProfiles Zinc finger RING-type profile. 213 254 IPR001841 -
Lele31g0179 264 SUPERFAMILY RING/U-box 212 258 - -
Lele31g0179 264 Pfam Ring finger domain 212 254 IPR001841 -
Lele31g0179 264 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 173 258 IPR013083 -
Lele31g0179 264 SMART ring_2 213 253 IPR001841 -
Lele31g0179 264 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 25 260 IPR033276 GO:0004842|GO:0016567|GO:0046621
Lele31g0179 264 FunFam E3 ubiquitin ligase BIG BROTHER 175 258 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele31g0179 Lele-ChrLele31 1752425 1757102 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g0179 20 262 C3H Transcription Factor Family AT3G63530 48.361 5.74e-79 237