Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g0169 ATGGCTTGCGGAAGCGAGCGGCTGGAGAAGGACGACGCACCTTCACTGCCGCAGTTTCACAAGTCTGAGAAGCAAGATGGCGATGAAGAAGAGGCCATGGAACAGGAAGAATACTCCAAGAATCAGCCTTCTGCGGAAGGTGGTTGTGGAGTTCTTATAGGGGAAAAAACAGAAAGTTTCGATCTTGACACCGAACAAGCGAAAATCGACCCATTAACGGAAGGCTCCGAAGTTGTCAAGAAAAGGCGCGGCAGAAAGCGTAAGCCAGAGGCGGAGGCCTCAGGAAATGAGGCGACGAGGCGTAGTGCCAGAGTCTCGAAGAAATTCTGTTATGTTTCCTTTGACTATGAAGACGAGGAAGAAGAACCTCTAAAAAGGAAAAGTGGGAAAAGTAGGAGAGGTCGTAAAAAGACGAAAGTTGCCGCAAATAAAACGTCAGTGATTGAAGAAGGTGTGGGAGCCGAGGACAATGGTGATTTAGCTGAAGAGAAGTTAGGACATTTGAAGCAGAGTGATTGTGGTCTCGAACAAGTAGAAAGTGGAAATAAGGAAATTTCAAGGCGTAGGAAGGCGGCTCAAAACGCGAAGGCAGAACATGAAGTATCGGCTAGAGATTCTTCAGAAGGCAGACCAGATAAAGGTTATAGTTTGAGCGCTTCTAAATCTCAAGTTAATAGGCAGGAGATGCCCAAAATAAACAAGCACGATCCTGAATGGATCGAAAAGGTGTCCTTAATGTGCCATCAGTGTCAGAGAAGTGATAAGGGGGAGGTTGTTAGGTGTACAATATGTAAGCGGAAAAGATTTTGCATCCCGTGTATTAAGAGTTGGTATCCTCAATGGAGAGAGGAAGATATTGCTGAGAAGTGTCCTGTGTGTCGTGGAAACTGCAATTGCAAAGCATGTCTGAGCTCTAAAAAATTAATTGAAACATTGAAGGATAAAGCAATAGTCGACAAAAATGAGAATGTTGAATACTGTAAGTATTTGCTTCCAGTGCTTCTTCCATGTCTAAGGAAGCTACATGAAGAACAAATGATCGAGAAGGAGATTGAAGCTAAAAGACAAGGCGTCTCACTTTCAGAGCTCCAGGTACTAAGGGCAGATTGCGAAGATCATGAGCGTGTTTACTGTGACAATTGTAAAACTTCGATTTTTGATTGTCACCGAAGCTGTCAAGAATGTTCTTTTGACCTGTGTCTTGTCTGTTGTCGTGAGATTCGTCAGGGGCAATTGGTTGGAGGTGTAGAGCCAGTTGAGCTTGAATTTATCAGTCGGGGGCTGGATTATATGCATGGTGGAAAGGGGTCAATATTAAGTAAATTAAACGTCGAGACAAAGACTGATGATGATCGTGACTGGTCAAGATCTAGTTTGAAGGTGACGAGTGATGGTAGCATCCCTTGTCCAAGGGTTCATGGTGGTTGTGGTCATAGTTATCTTGAACTTCAATGTATATTTCCTGATAATGAGATTTCTGAACTTGTAAAGAAAGCAGAAAATATGGCTAAAGCGTATAATCTTGATGATGCAATGCGGACAAGTAACCAGTGTTGTCAATGTTTCAAACTAGATAGTGACAACAATAATGTTGGAAACGAGAACAGGTTAAAGGCTGCTTCTCGTGAAGATCCCAGTGACACTGACAACTATATATACTGTCCAAGGGCTGTAGATTTAGGACTTAAGGATGTGAAGCATTTTCAGTGGCACTGGAGTAAAGGAGAGCCAGTGATTGTAAGTAATGTTCTTGAATGCACATCTGGTTTAAGCTGGGAACCACTGGTCATGTGGCGTGCTTGCCGTCAGAAAACTAAAAGCAAGCATGAAAGAAATTTGGCAGTGAAGGTCATTGATTGCTTGGACTTGTGTGAGGGCGACATCAATATCCACCAATTCTTTACAGGGTACTCTGAAGGTCGAAAAGATTTTAAAATGGGGCCGCAATTATTGAAATTGAAAGATTGGCCTCCTTCTAAATTATTTGAGGAACAGTTGCCACGTCATTGTGCCGAGTTCATTTCTTCCTTACCGTTTAAGGAATATACAAATCCCCATAAGGGTGGTGTTTTAAACCTTGCCTCAATGCTACCAGTCGAAGTTATAAAGCCAGATATTGGTCCAAAGACATATATAGCTTATGGAATTCCTATAGAGCTTGGGCGGGGAGATTCTGTGACAAAGCTTCATTGTGATATGTCTGATGCAGTAAATGTTTTGACGCATACTTTTGAAACGCCCCTTGATCCAGCTCTGCTTGCAAAAATAAAGGAATTAAAAAGAAAGCACCTTGAACAGGACATAGAGGAGCTGTATGGCGGTGGTCAGGGGGGAGAAGCTAATGCTGATAATGGAAAAAATGCAGATTTTGAAAATACGTTTGTTGGATATGATTCTGTTGAGGGAGGTGCCCTCTGGGATATTTTTAGGAGACAGGATGTGCCTAAACTGCAGGAATACCTTAAGAAGCACTTCAGAGAATTCAGGCACGTCAACTGTATTCCGTTGCAGCAGGTTGTTCATCCTATCCATGATCAGACCTTTTATTTGACTATGGATCATAAGAGAAAGCTGAAGGAGGAATATGGAATTGAACCATGGACATTTGTTCAGAAACTGGGAGATGCAGTTTTGATTCCTGCTGGTTGTCCTCACCAAGTCAGAAATCTCAAGTCATGTATCAAGGTTGCTCTCGATTTCGTGTCACCTGAAAGTGTAGATGAGTGTCTTCGTTTGACAGAGGAATTTCGCATACTTCCCATAAATCACAGGGCTATTGAAGACAAATTGGAGTATGTTGTGGATCAAAAAGATGCTCATTCATGCCATGAGAACGGTAGTGAAGGAAGTTTGAGAAAGCAAGGAAGAAAGCGCTAA 2877 0.4251 MACGSERLEKDDAPSLPQFHKSEKQDGDEEEAMEQEEYSKNQPSAEGGCGVLIGEKTESFDLDTEQAKIDPLTEGSEVVKKRRGRKRKPEAEASGNEATRRSARVSKKFCYVSFDYEDEEEEPLKRKSGKSRRGRKKTKVAANKTSVIEEGVGAEDNGDLAEEKLGHLKQSDCGLEQVESGNKEISRRRKAAQNAKAEHEVSARDSSEGRPDKGYSLSASKSQVNRQEMPKINKHDPEWIEKVSLMCHQCQRSDKGEVVRCTICKRKRFCIPCIKSWYPQWREEDIAEKCPVCRGNCNCKACLSSKKLIETLKDKAIVDKNENVEYCKYLLPVLLPCLRKLHEEQMIEKEIEAKRQGVSLSELQVLRADCEDHERVYCDNCKTSIFDCHRSCQECSFDLCLVCCREIRQGQLVGGVEPVELEFISRGLDYMHGGKGSILSKLNVETKTDDDRDWSRSSLKVTSDGSIPCPRVHGGCGHSYLELQCIFPDNEISELVKKAENMAKAYNLDDAMRTSNQCCQCFKLDSDNNNVGNENRLKAASREDPSDTDNYIYCPRAVDLGLKDVKHFQWHWSKGEPVIVSNVLECTSGLSWEPLVMWRACRQKTKSKHERNLAVKVIDCLDLCEGDINIHQFFTGYSEGRKDFKMGPQLLKLKDWPPSKLFEEQLPRHCAEFISSLPFKEYTNPHKGGVLNLASMLPVEVIKPDIGPKTYIAYGIPIELGRGDSVTKLHCDMSDAVNVLTHTFETPLDPALLAKIKELKRKHLEQDIEELYGGGQGGEANADNGKNADFENTFVGYDSVEGGALWDIFRRQDVPKLQEYLKKHFREFRHVNCIPLQQVVHPIHDQTFYLTMDHKRKLKEEYGIEPWTFVQKLGDAVLIPAGCPHQVRNLKSCIKVALDFVSPESVDECLRLTEEFRILPINHRAIEDKLEYVVDQKDAHSCHENGSEGSLRKQGRKR 958
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g0169 958 Coils Coil 175 195 - -
Lele31g0169 958 MobiDBLite consensus disorder prediction 1 28 - -
Lele31g0169 958 MobiDBLite consensus disorder prediction 88 102 - -
Lele31g0169 958 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 244 313 IPR018866 -
Lele31g0169 958 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 33 931 IPR045109 GO:0032454|GO:0033169
Lele31g0169 958 SUPERFAMILY Clavaminate synthase-like 562 924 - -
Lele31g0169 958 MobiDBLite consensus disorder prediction 117 156 - -
Lele31g0169 958 MobiDBLite consensus disorder prediction 58 80 - -
Lele31g0169 958 MobiDBLite consensus disorder prediction 181 211 - -
Lele31g0169 958 Gene3D Cupin 559 926 - -
Lele31g0169 958 ProSiteProfiles Zinc finger RING-type profile. 247 294 IPR001841 -
Lele31g0169 958 MobiDBLite consensus disorder prediction 1 102 - -
Lele31g0169 958 Pfam JmjC domain, hydroxylase 798 900 IPR003347 -
Lele31g0169 958 ProSiteProfiles JmjC domain profile. 686 917 IPR003347 -
Lele31g0169 958 MobiDBLite consensus disorder prediction 171 232 - -
Lele31g0169 958 SMART cupin_9 666 917 IPR003347 -
Lele31g0169 958 FunFam Transcription factor jumonji domain-containing protein 549 926 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g0169 Lele-ChrLele31 1634425 1648532 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Lele31g0169 JmjC 3.7e-15 CL0029