Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g0153 ATGAGTGTCCTCCATGCAACCAAACTTGAACATCCCGGGTTTAGCAGCAGAAGGAAGAAGAAAACAATGGCGCCGAAAGCTGCCAGGATCACCAGAAATCCTGAATTGATAAGGGGGGTCGGAAAGTTTTCGAGGTCAAAGATGTACCACAAGAGAGGTTTGTGGGCCATCAAGGCTAAGAACGGCGGCGCTTTCCCTCATCTCGATCCCAAACCTAAACCTGAAACTGCTGCCGAGAAGCCTCCCAAGTTCTACCCTGCTGACGACGTGAAGAAGCCCCTTCTAAATAAGCACAAACCAAAACCTACCAAGCTCAGGGCCAGCATTACTCCTGGAACAGTATTGATACTTCTTGCTGGGAGATTCATGGGAAAGAGAGTAGTGTTCCTGAAGCAGCTTCCTTCTGGATTGCTTCTTGTTACCGGTCCATTTAAGGTAAATGGAGTTCCTTTGAGGCGTGTAAGTCAGTCTTATGTCATTGGAACATCCACCAAGGTAGATATCTCAGGAGTTAATCTGGAGAAGTTCGACGACAAATACTTCGCCAAGAAAGCTGAGAAGAAGAAGCAAAAGGGAGAGGGAGAGTTCTTTGAGGCGGAGAAGGAGGAGAAAAATGTGATCCCACAAGAGAAAAAAGATGATCAGAAAGTAGTGGACGCAGCATTGATAAAAGCCATTGAGAGCATTCCTGATTTGAAGGCTTATTTGGCTGCGAGGTTTTCTCTCAAAACAGGCATGAAACCTCATGAGCTTGTCTTCTAA 762 0.4619 MSVLHATKLEHPGFSSRRKKKTMAPKAARITRNPELIRGVGKFSRSKMYHKRGLWAIKAKNGGAFPHLDPKPKPETAAEKPPKFYPADDVKKPLLNKHKPKPTKLRASITPGTVLILLAGRFMGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVSQSYVIGTSTKVDISGVNLEKFDDKYFAKKAEKKKQKGEGEFFEAEKEEKNVIPQEKKDDQKVVDAALIKAIESIPDLKAYLAARFSLKTGMKPHELVF 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g0153 253 MobiDBLite consensus disorder prediction 65 104 - -
Lele31g0153 253 FunFam 60S ribosomal protein L6 107 191 - -
Lele31g0153 253 Gene3D - 107 191 IPR014722 -
Lele31g0153 253 CDD KOW_RPL6 101 253 IPR041997 -
Lele31g0153 253 PANTHER 60S RIBOSOMAL PROTEIN L6 23 253 IPR000915 GO:0003735|GO:0005840|GO:0006412
Lele31g0153 253 MobiDBLite consensus disorder prediction 72 96 - -
Lele31g0153 253 Coils Coil 182 202 - -
Lele31g0153 253 MobiDBLite consensus disorder prediction 1 27 - -
Lele31g0153 253 SUPERFAMILY Translation proteins SH3-like domain 107 193 IPR008991 -
Lele31g0153 253 Pfam Ribosomal protein L6e 146 253 IPR000915 GO:0003735|GO:0005840|GO:0006412
Lele31g0153 253 Pfam Ribosomal protein L6, N-terminal domain 26 81 IPR005568 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g0153 Lele-ChrLele31 1517145 1519822 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g0153 26 253 Cytoplasmic Ribosomal Protein Gene Family AT1G74060 79.386 1.65e-116 331