Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g0140 ATGGAAAAGCAGCGAAACCAAAATCACCACCACCGTAACCCCTCCCACAAGAACAACCACCGCCACAACCGTCAAACTTGGGGCACGTGGGAGGAGCTTCTCCTCGCCTCCGCCGTCAAACGCCATGGTTCCGACGACTGGGACACCGTCGCCATGGAGATCCAGAACCGCACCAACATCCCTCACCTCCTCACCACCGCACGCAACTGCGAGCAGAAATTCCTCGATCTCGAACGCCGATTCACCGCCCAATGCAACGACGCCGTTCTGGAGCCTCCGGAGAACGGCGTTCCCGCCGGCGACGTCGTCGATCACGTTCCCTGGCTCGACGAATTGCGTAAGCTCCGGGTATCTGAGCTCCGGCGAGAGGTCCAACGTCACGACCATAAGGTGAAGAGATTGGAGGAAGAGAGAGAAAAAAGCTTGAAGGAGAATGACGTGGAACGAGATGAGAAACCAGATCTGGAAGACTCCGGGAAACCGGAAAACGACGAAAAGAACGGAGGAGGAGAAGAACCTGAACCGGCGAATTCTGAACCGGGGAGGCGGGTCGAGGACGATGGAAATGATAATAGTAACGATAATAATAATAACAATAACAGCAGTACTAATAAGCTTCCAACGGGGGACGACTCCGACCGGGACAACCAATCAGTTAATGAGTCTAATTCGACCGGTTCAAGATCCGCGGGAGAGAAAACCGGGGAGGAAGATGTGAAGCCTGAACCGCCTAAGGCTCAAGCCGGTCCGAAAAAACCGGATCCGACTGTGGATAAAAAAGTGGAGGACTCGTCCGAGTTGAGAGACTCGGTGGCCCACTCGGAAGGGGGAGGGACGAGGGAGAGCGGCGAGGTGCAGAGCTCGGCGAGCTTGACGAGGAAGAGGAAGACGCGAAAGAGGAAGAAGGTCTCCGGCGGCGGAGGTAACGGCGAGGAGGAGGCGCCGGAGAACGATACGGTGGCGGCGAAATCACAACCGTTGGTTGGCCTCTTGGAGCTGATCAAAGGACATGAAAACAGCTCGTTGTTCGAGCGCCGTCTTGAAAGCCAGGAGGAATGGGAAAAATACAAAGGCATGGTACGTGAGCACGTGGACTTAGAAATCATACAAACGCGGCTTCGAAACGGCTACTACTCCTCCGGCACCACCGCCTTCTTCCGTGACCTCTTCCTCCTCTTCACCAACTCCATCGCCTTCTTCCCCTCCCACTCCCTCCACTCACGCGCCGCCACCCACCTCTGCAATCTCCTCTCCGATGAGATGAAGAACTTCTCCCAACCCCACAATAACAACACCCCTCCTTCACTCCCACCTCCGCCGCCTCCACCGTCGTCATCCTCGGTCAAGCCTGATTCTTCTAATAATAATTTGATTTCCAAGGACAAAGCTTCTGCTCCCATACTGGTTTGCCGGAAACGCAGTTCCATGTCCAGTAAACCTTCCTCTGCTTCTACCTTTAGTAAGGGTAGTGACCGGTTAAGCAGTGAGAAGAAACCACCACCACCCCAGAAGAGGCCACCGTCGTCGGTTTCTGATGATTCAGATGAAGAACCTCTTTCTCCTCCTCCTGCTCTGCCGCCTAAGTTGAAGGAGAAGCCGGTGACCGGAGTAAGAAGCATGAGAAGAGGCAACAAAAACCTCGGTGGCAGCAGCGGGGCCGGAGCCACCCAGAACAAGAAGCTTCAGTCCAGTAGTAAAGCAAGCCCTTCCAAATCAGATCACAAAAGCAAAGCAGTGGCGGCGGCGGCAGCAGCAGAAGCAGAAGAACAAGCAGCCTCTGCGTCGGACAAAAAGAGGAGCGCGGCCGCAGATTTCTTGAAAAGGATAAAGAAAAACAGCTCCGGCGAGGCAATGAAGAGCGCCGGGGGCGGCCGAGGAGGCGTTGGCGGAAGAGATCAGAAGAAGTTGGTGGGAAGTGGCGGAAAGGGTGAACAGAAAGGTGGGAGGGAGAGAACATTGAGGAATGGTGGTGGAACAGGGGAGAGGAATACAACAACAGAGAATAATAGCAATCAGAAGTCAAAGAGAAGCGTAGGAAGGCCCCCGAAGAAAGTAGCAGAAAGTAATATCAATAACAATAATGCTTCTGGTTCTGCTAAACGCGGAAGGGAAAGTGGTGGAGGTGGGGGAGGGAAGGATAAAAGGCCAAAGAAACGAAGTAGGAAGTAA 2169 0.5417 MEKQRNQNHHHRNPSHKNNHRHNRQTWGTWEELLLASAVKRHGSDDWDTVAMEIQNRTNIPHLLTTARNCEQKFLDLERRFTAQCNDAVLEPPENGVPAGDVVDHVPWLDELRKLRVSELRREVQRHDHKVKRLEEEREKSLKENDVERDEKPDLEDSGKPENDEKNGGGEEPEPANSEPGRRVEDDGNDNSNDNNNNNNSSTNKLPTGDDSDRDNQSVNESNSTGSRSAGEKTGEEDVKPEPPKAQAGPKKPDPTVDKKVEDSSELRDSVAHSEGGGTRESGEVQSSASLTRKRKTRKRKKVSGGGGNGEEEAPENDTVAAKSQPLVGLLELIKGHENSSLFERRLESQEEWEKYKGMVREHVDLEIIQTRLRNGYYSSGTTAFFRDLFLLFTNSIAFFPSHSLHSRAATHLCNLLSDEMKNFSQPHNNNTPPSLPPPPPPPSSSSVKPDSSNNNLISKDKASAPILVCRKRSSMSSKPSSASTFSKGSDRLSSEKKPPPPQKRPPSSVSDDSDEEPLSPPPALPPKLKEKPVTGVRSMRRGNKNLGGSSGAGATQNKKLQSSSKASPSKSDHKSKAVAAAAAAEAEEQAASASDKKRSAAADFLKRIKKNSSGEAMKSAGGGRGGVGGRDQKKLVGSGGKGEQKGGRERTLRNGGGTGERNTTTENNSNQKSKRSVGRPPKKVAESNINNNNASGSAKRGRESGGGGGGKDKRPKKRSRK 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g0140 722 MobiDBLite consensus disorder prediction 474 490 - -
Lele31g0140 722 CDD SANT 26 58 IPR001005 -
Lele31g0140 722 MobiDBLite consensus disorder prediction 544 569 - -
Lele31g0140 722 Coils Coil 117 151 - -
Lele31g0140 722 MobiDBLite consensus disorder prediction 9 23 - -
Lele31g0140 722 CDD Bromodomain 330 413 - -
Lele31g0140 722 MobiDBLite consensus disorder prediction 591 614 - -
Lele31g0140 722 MobiDBLite consensus disorder prediction 424 722 - -
Lele31g0140 722 Gene3D - 322 432 IPR036427 GO:0005515
Lele31g0140 722 MobiDBLite consensus disorder prediction 1 23 - -
Lele31g0140 722 Pfam Myb-like DNA-binding domain 24 58 IPR001005 -
Lele31g0140 722 MobiDBLite consensus disorder prediction 657 676 - -
Lele31g0140 722 Gene3D - 15 86 - -
Lele31g0140 722 MobiDBLite consensus disorder prediction 191 207 - -
Lele31g0140 722 SUPERFAMILY Bromodomain 323 428 IPR036427 GO:0005515
Lele31g0140 722 Coils Coil 584 604 - -
Lele31g0140 722 MobiDBLite consensus disorder prediction 135 190 - -
Lele31g0140 722 PANTHER DNA-BINDING BROMODOMAIN-CONTAINING PROTEIN 14 722 - -
Lele31g0140 722 MobiDBLite consensus disorder prediction 686 700 - -
Lele31g0140 722 ProSiteProfiles Bromodomain profile. 335 407 IPR001487 GO:0005515
Lele31g0140 722 ProSiteProfiles Myb-like domain profile. 19 58 IPR001005 -
Lele31g0140 722 MobiDBLite consensus disorder prediction 135 321 - -
Lele31g0140 722 MobiDBLite consensus disorder prediction 431 447 - -
Lele31g0140 722 MobiDBLite consensus disorder prediction 231 275 - -
Lele31g0140 722 Pfam Bromodomain 330 411 IPR001487 GO:0005515
Lele31g0140 722 SMART bromo_6 128 426 IPR001487 GO:0005515
Lele31g0140 722 SUPERFAMILY Homeodomain-like 19 59 IPR009057 -
Lele31g0140 722 SMART sant 23 80 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g0140 Lele-ChrLele31 1422023 1427647 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele31g0140 Bromodomain 2.2e-09 No_clan