Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g0138 ATGGAGCTTGGCTTGAGCTTAGGAGCTTCGAAGCCTTTCACTGTCATGGAAAAGCCTTCTGAATTACCAGCTGATCTGAACACTACCTTATCGATTGGTCCAATCACTACCACCATCAGCAAAAGCTGTGAAGAAGAGGACGAAGAAGATCATCATCAAGAAGAAGCAGCCAACAAGAAGGAAAATAACACTACTACTGTGAAAGAAGATCATGAAGCTTCAACTTATAAACACTCTTCTGCTTCTCTTTCCTCTTCTTCCAAATCCAACAACAACAACTCCTTACAGCTTCATCTTCTTCCTCATCACTCCAATCCTGTACCTCTCTCTTCCTTCTCATGGCATCCTCCTTCTGACCACTGTGCTGAGGTGGGAGGTAATTTAGGGAGGGCTTTGAAGGTGAAGACGAAGGCAGAGGAGGAAGAGTCGGAGGAGAGGACGGTGGTGTCGTCGTCTCCGATGAGCGGTGCGTCGTCGTTTCCGGTGGATCTGTGTATATACAGTAGTAATAATACTAATAATAAAGGATCATCAGGGAATAATTACAATAACAGAAAGAGGCTGCGGAATAATAATGAATCAGAAGGTGAAGCAGGTAATTATAATTACTACGATCAAAGAGGTTGTTCATCAAGAGCAAGCGATGAAGACGACAACAACAACAACGTTGTTGGTGGTCGTGATTGTGGTACCAGAAAGAAGCTCAGACTCTCTAAAGAACAATCTGCTTTTCTTGAAGAAAGCTTCAAGGAACACAGTACTCTTAATCCTAAACAAAAACTTGCTCTTGCCAAACAACTCAATCTTCGTCCTCGCCAAGTCGAAGTCTGGTTTCAAAACCGAAGAGCAAGGACGAAGCTGAAGCAGACGGAGGTGGATTGTGAGTACTTGAAGAGATGCTGTGAGACGCTATCAGAAGAGAATAGGAGGCTGCAGAAGGAGCTTCAAGAACTGAGAGCTTTGAAGGCTTCAAACTCGAACCCTTTCTTCATGAAATTACCTGCCACCACCTTAACCATGTGCCGTTCCTGTGAGCGCGTTGCACCCAATAATTCCTCCTCCAATAATAATAATTCTGCTTCTTCTTCTAAGCCCAAAATTTCCTTCCCCTTCGCCAAACCCAAGTTCTATCCTTTTCCTCACTCCAAACCACACCAGTCTTGA 1164 0.4407 MELGLSLGASKPFTVMEKPSELPADLNTTLSIGPITTTISKSCEEEDEEDHHQEEAANKKENNTTTVKEDHEASTYKHSSASLSSSSKSNNNNSLQLHLLPHHSNPVPLSSFSWHPPSDHCAEVGGNLGRALKVKTKAEEEESEERTVVSSSPMSGASSFPVDLCIYSSNNTNNKGSSGNNYNNRKRLRNNNESEGEAGNYNYYDQRGCSSRASDEDDNNNNVVGGRDCGTRKKLRLSKEQSAFLEESFKEHSTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLSEENRRLQKELQELRALKASNSNPFFMKLPATTLTMCRSCERVAPNNSSSNNNNSASSSKPKISFPFAKPKFYPFPHSKPHQS 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g0138 387 MobiDBLite consensus disorder prediction 170 187 - -
Lele31g0138 387 MobiDBLite consensus disorder prediction 194 226 - -
Lele31g0138 387 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 84 363 - -
Lele31g0138 387 ProSiteProfiles 'Homeobox' domain profile. 228 288 IPR001356 GO:0003677
Lele31g0138 387 CDD bZIP 281 320 - -
Lele31g0138 387 SMART HOX_1 230 292 IPR001356 GO:0003677
Lele31g0138 387 ProSitePatterns 'Homeobox' domain signature. 263 286 IPR017970 GO:0000981|GO:0006355
Lele31g0138 387 MobiDBLite consensus disorder prediction 24 40 - -
Lele31g0138 387 MobiDBLite consensus disorder prediction 348 387 - -
Lele31g0138 387 CDD homeodomain 232 289 IPR001356 GO:0003677
Lele31g0138 387 Pfam Homeobox associated leucine zipper 288 322 IPR003106 GO:0006355|GO:0043565
Lele31g0138 387 Coils Coil 294 324 - -
Lele31g0138 387 SMART halz 288 333 IPR003106 GO:0006355|GO:0043565
Lele31g0138 387 Gene3D - 236 286 - -
Lele31g0138 387 MobiDBLite consensus disorder prediction 134 157 - -
Lele31g0138 387 SUPERFAMILY Homeodomain-like 220 289 IPR009057 -
Lele31g0138 387 FunFam Homeobox-leucine zipper protein 18 215 293 - -
Lele31g0138 387 MobiDBLite consensus disorder prediction 1 102 - -
Lele31g0138 387 MobiDBLite consensus disorder prediction 77 102 - -
Lele31g0138 387 MobiDBLite consensus disorder prediction 41 76 - -
Lele31g0138 387 Pfam Homeodomain 232 286 IPR001356 GO:0003677
Lele31g0138 387 MobiDBLite consensus disorder prediction 348 366 - -
Lele31g0138 387 MobiDBLite consensus disorder prediction 170 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g0138 Lele-ChrLele31 1390760 1392519 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g0138 207 379 Homeobox Transcription Factor Family AT4G37790 61.143 1.22e-64 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lele31g0138 Homeodomain 1.9e-15 CL0123