Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g0131 ATGGGCTCCTTTTCTCAGCCATCGCATTATTTTGCGTTATATATTATTCCTTCAGCTATCCATTGCCTTTTTCTCAGCATATCATCATCAACTGCTCTAGACATCACCACAGATGCTGAAGCTTTGATCTCATTTAAGTCTCACTTGAGTAATATTGACACTCCTCACCCTTTATCTTCTTGGAACCAGAGTTCATCATCACCATGCAACTGGTATGGTGTAACCTGTAATAGGTTTGGCCACAGAGTGATAGGCTTGAATCTCTCGAGCTTAAGACTCTCAGGTCAGTTAAGCCCTTATATAGGTAACCTCACTTTTCTTAAGTCCCTCCAGTTGCAGGATAACCAGTTTAAAGGGGTGATTCCTGAGCAAATTGGCCATCTCATTCGGTTAAGAGCTCTAGACTTGAGCTCTAACAGAATAGAGGGCATGCTTCCTTCCAACATCACTCGCTTGGCCAACCTCGTTAGACTCAACTTATCCTCAAACTATATAGTCAGCCAAATTCCTCGAGATATTGACAGCATGAGAAAGCTTCAGGTCTTGAGATTGGGAAGCAATAGATTGTATGGTGTAGTTACACCAACTCTTGGGAACATTTCATCTCTCACAAATATCAGTTTCGGCACAAACAGTCTAAGTGGTGGGATTCCCAGTGAATTAGGTAGGCTCAAGAGCTTAATTGAGCTTGATCTCACTGTTAACAATCTCACTGGGACTATTCCTTCTTCTATATATAACTTATCTTCCCTAGTTAAATTGGCTGCCGCTACCAACGATTTATGGGGTGATATTCCTCAAGATGTTGGTCACAGACTTCCAAAACTTCTAATGTTCAATTTCTGCTTTAATAGATTCACAGGTAGAATTCCTCCGTCTTTGCACAATCTCACCAACATTCAAGTTATTCGCATGCATTCCAACCTTTTGGAAGGGACTGTGCCATCAGGTCTCGGAAATCTCCCCTTCCTTCGTATGTATAGTATAGCATATAATAGGATAGTGAGCTCAGAAGATAGAGGCCTAGACTTCATTTCTTCATTGGCAAATAGCACCCACTTGAACTTTCTTGCAATTAATGGCAATAGGTTAAAAGGTGTAATTCCAGAGACCATTGGAAATCTCTCTAAGGTTCTCTCAATGTTATTCATGGGAGGGAATCTTTTCCACGGAAACATACCCCCCTCGATAGCAAATCTTAGAGGCTTGAGTTTATTAGACTTGAGTCGCAACGCAATCTCAGGAGAAATTCCTTTCGAGTTAAGCCAACTGGAGGAGCTGCAAGAGCTCAGTCTGGCCGGGAATCAGATATCTGGAAGTATTCCAAATTCCCTTGGCCGTCTCCAAAAGCTGAACAGACTTTATTTGTCAAGCAATCAGCTTGCGGGTGAAATACCTTCAAGTTTTGGGAATTTTCAGAGCATTCTCTCCATGGACTTATCTCACAACAAGCTTAATGGAAGCATACCTAGAGCAGTTCTAAGTCTCTCATCTCTGACCACTGTTTTAAACTTGTCTAAGAACTTTTTAAGTGGATCTTTGCCTCAAGAAGTAGGGAGTTTGATCAGAGTTTCTACCTTAGACTTCTCTGACAACATTTTAGTTGGTGAAATCCCCAGCTCAATAGGCAGTTGTCTAAGCCTAGAAAAGCTATTTTTGGCACGAAATATGCTTTCAGGTCCTATTCCAAAAGCTCTTGGGGCCATTAGAGGCTTGGAAATTCTAGACCTTTCAACCAACCAACTCTGTAGATCCATTCCTGTCGAACTTCAAAATCTAAAAGCCCTTCAGTTATTGAACCTTTCTTATAATGACTTAGAAGGAGTCATCCCCAGTGGGGGAGTTTTCACAAATCTCTCTTCTTTCCATTTTGAAGGCAATAAGAAACTATGTTTACTTTCCACATGTGCCAATCAAAGACATGGGAGAAAGACGCTCATAATTTATATCACCATAGCTATTGTGGCGACATTGATAGTATGTTTCACAATTGGCCTACTGTTGTATATGAGGAGCAGAAAATCAAAGGCAACGACACCATTTGAAATCCCAAAGCCAAATCATCCAACGGTCTCTTATGATGCGCTTCGACGAGCCACAGGGGACTTCAGCCCAGAAAATTTACTTGGAACCGGAAGCTTTGGCCGGGTCTATAGAGGCCATCTTGGTGAAGGGAGTATTAGTACTAGTGTTGCAGTAAAAGTACTAGATACTTTAAGGACAAGTTCCTTGAAGAGTTTCTTTGCAGAGTGTGAGGCTTTGAAGAATGAGAGGCATCGAAATCTGGTTAAGCTAATCACCTCATGTTCTAGTATAGACTTCAAGAACAAAGAATTTTTGGCTTTGACTTATGAGTTCATATGTAATGGAAACTTGGATGATTGGATTAAGGGAAAGAGACAGCGTGCAAATGGAAATGGGTTGAATCTTATGGAGAGACTGAACATTGCTATTGATGTTTCTTGTGCATTGGATTATCTGCACAATGACACTGAAACTCCTATTGTGCATTGTGATTTGAAGCCTAGCAATATTCTTCTGTGTGAAGATATGACTGCAAAGGTGGGAGATTTTGGATTGGCTAGAGTGTCGATTGAAAGACCAACTAATCAAGTCTCAATAAGCTCCACTCATGCTCTCAAAGGTTCAATCGGTTACATACCTCCAGAATATGGATGGGGAGAAAAGCCATCAGTAGAGGGAGATACATACAGTTTTGGTATTGTATTGCTAGAGCTCTTTTGTGGGAGAAGCCCAACAGATGATAGCTTCAGAGGTGGCTCAAGTTTAACAAGATGGGTTCAATCAGCAATCCCAGACAAGACTGTGCAAGTCATAGACCCTCAGCTTCTTTCACACATTTTTCACAATGAGCTTTCTGATAGAGGTTCCAATCTACAACTTGATTGTGTGAATGGAATCCTGGGAGTTGGGTTATCCTGCACTGCAGATTCTCCAGATGAACGCCTTAAGAGGAAAGATGCTGTTACGAAATTAAAAGTTGTCAGAGACAATCTTTCGAAACACAATCAAAACATGGGCCCTTCAGAACATTAG 3057 0.4118 MGSFSQPSHYFALYIIPSAIHCLFLSISSSTALDITTDAEALISFKSHLSNIDTPHPLSSWNQSSSSPCNWYGVTCNRFGHRVIGLNLSSLRLSGQLSPYIGNLTFLKSLQLQDNQFKGVIPEQIGHLIRLRALDLSSNRIEGMLPSNITRLANLVRLNLSSNYIVSQIPRDIDSMRKLQVLRLGSNRLYGVVTPTLGNISSLTNISFGTNSLSGGIPSELGRLKSLIELDLTVNNLTGTIPSSIYNLSSLVKLAAATNDLWGDIPQDVGHRLPKLLMFNFCFNRFTGRIPPSLHNLTNIQVIRMHSNLLEGTVPSGLGNLPFLRMYSIAYNRIVSSEDRGLDFISSLANSTHLNFLAINGNRLKGVIPETIGNLSKVLSMLFMGGNLFHGNIPPSIANLRGLSLLDLSRNAISGEIPFELSQLEELQELSLAGNQISGSIPNSLGRLQKLNRLYLSSNQLAGEIPSSFGNFQSILSMDLSHNKLNGSIPRAVLSLSSLTTVLNLSKNFLSGSLPQEVGSLIRVSTLDFSDNILVGEIPSSIGSCLSLEKLFLARNMLSGPIPKALGAIRGLEILDLSTNQLCRSIPVELQNLKALQLLNLSYNDLEGVIPSGGVFTNLSSFHFEGNKKLCLLSTCANQRHGRKTLIIYITIAIVATLIVCFTIGLLLYMRSRKSKATTPFEIPKPNHPTVSYDALRRATGDFSPENLLGTGSFGRVYRGHLGEGSISTSVAVKVLDTLRTSSLKSFFAECEALKNERHRNLVKLITSCSSIDFKNKEFLALTYEFICNGNLDDWIKGKRQRANGNGLNLMERLNIAIDVSCALDYLHNDTETPIVHCDLKPSNILLCEDMTAKVGDFGLARVSIERPTNQVSISSTHALKGSIGYIPPEYGWGEKPSVEGDTYSFGIVLLELFCGRSPTDDSFRGGSSLTRWVQSAIPDKTVQVIDPQLLSHIFHNELSDRGSNLQLDCVNGILGVGLSCTADSPDERLKRKDAVTKLKVVRDNLSKHNQNMGPSEH 1018
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g0131 1018 SMART serkin_6 703 975 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele31g0131 1018 SUPERFAMILY L domain-like 37 335 - -
Lele31g0131 1018 Gene3D Ribonuclease Inhibitor 342 640 IPR032675 -
Lele31g0131 1018 ProSitePatterns Serine/Threonine protein kinases active-site signature. 835 847 IPR008271 GO:0004672|GO:0006468
Lele31g0131 1018 ProSitePatterns Protein kinases ATP-binding region signature. 709 734 IPR017441 GO:0005524
Lele31g0131 1018 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 787 1012 - -
Lele31g0131 1018 Gene3D Ribonuclease Inhibitor 195 341 IPR032675 -
Lele31g0131 1018 FunFam LRR receptor-like serine/threonine-protein kinase EFR 341 641 - -
Lele31g0131 1018 FunFam Putative leucine-rich repeat receptor-like protein kinase family protein 234 340 - -
Lele31g0131 1018 Pfam Leucine rich repeat N-terminal domain 37 77 IPR013210 -
Lele31g0131 1018 Pfam Leucine Rich Repeat 450 472 IPR001611 GO:0005515
Lele31g0131 1018 Gene3D Ribonuclease Inhibitor 34 194 IPR032675 -
Lele31g0131 1018 FunFam LRR receptor-like serine/threonine-protein kinase EFR 674 786 - -
Lele31g0131 1018 Gene3D Transferase(Phosphotransferase) domain 1 787 1016 - -
Lele31g0131 1018 Pfam Protein tyrosine and serine/threonine kinase 707 922 IPR001245 GO:0004672|GO:0006468
Lele31g0131 1018 ProSiteProfiles Protein kinase domain profile. 703 975 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele31g0131 1018 SUPERFAMILY Protein kinase-like (PK-like) 680 999 IPR011009 -
Lele31g0131 1018 FunFam Leucine-rich repeat receptor-like protein kinase 35 195 - -
Lele31g0131 1018 Gene3D Phosphorylase Kinase; domain 1 685 786 - -
Lele31g0131 1018 SMART LRR_typ_2 128 151 IPR003591 -
Lele31g0131 1018 SMART LRR_typ_2 176 199 IPR003591 -
Lele31g0131 1018 SMART LRR_typ_2 424 447 IPR003591 -
Lele31g0131 1018 SMART LRR_typ_2 104 127 IPR003591 -
Lele31g0131 1018 SMART LRR_typ_2 569 592 IPR003591 -
Lele31g0131 1018 SMART LRR_typ_2 152 175 IPR003591 -
Lele31g0131 1018 SMART LRR_typ_2 496 521 IPR003591 -
Lele31g0131 1018 SMART LRR_typ_2 297 321 IPR003591 -
Lele31g0131 1018 SMART LRR_typ_2 400 421 IPR003591 -
Lele31g0131 1018 SMART LRR_typ_2 224 248 IPR003591 -
Lele31g0131 1018 SMART LRR_typ_2 448 471 IPR003591 -
Lele31g0131 1018 SMART LRR_typ_2 593 618 IPR003591 -
Lele31g0131 1018 Pfam Leucine rich repeat 547 606 IPR001611 GO:0005515
Lele31g0131 1018 Pfam Leucine rich repeat 130 189 IPR001611 GO:0005515
Lele31g0131 1018 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 237 997 - -
Lele31g0131 1018 SUPERFAMILY L domain-like 349 633 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g0131 Lele-ChrLele31 1305654 1308864 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g0131 37 1011 Receptor kinase-like Gene Family AT3G47570 41.059 0.0 687
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Lele31g0131 PK_Tyr_Ser-Thr 2e-36 CL0016