Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g0130 ATGGGCTCCTTTTCTCAGCCATCGCATTATTTTGCGTTATATATTATGCCTTTAGCTATCCATTGCCTTTTTCTCAGCATATCATCATCAACTGCTCTAGACATCACCACAGATACTGAAGCTTTGATCTCATTTAAGTCTCACTTGAGTAATATTGACACTCCTCACCCTTTATCTTCTTGGAACCAGAGTTCATCATCACCATGCAACTGGTATGGTGTAACCTGTAATAGGTTTGGCCACAGAGTGATAGGCTTGAATCTCTCGAGCTTAAGACTCTCAGGTCAGTTAAGCCCTTATATAGGTAACCTCACTTTTCTTAAGTCCCTCCAGTTGCAGGATAACCAGTTTGAAGGGGTGATTCCTGAGCAAATTGGCCATCTCATTCGGTTAAGAGCTCTAGACTTGAGCTCTAACAGAATAGAGGGTATGCTTCCTTCAAACATCACTCGCTTGGAGAACCTTGTGACACTCAACTTATCCTTCAACTATATAGTCAGCCAAATTCCTCAAGATATTGACAGCTTGACAGAGCTTCGAGTCTTGAGATTGGGAAGCAACAGATTGTATGGTGATATTCCACCAACTCTTGGGAACGTTTCATCTCTCACAAATATCAGTTTCGGCACAAACAGTCTTAGAGGAGGGATTCCGAGTGAATTAGGAAGGCTCAAGGACCTGATTGAGCTTGATATCACCATTAACAATCTCAATGGGACTATTCCTTCTTCTATATATAACTTATCTTCCATGGTAAACTTGGCTGTTGCTGCCAACGATTTTTGGGGTGATATTCCTCAGGATGTTGGCCATAAACTTCCAAAACTTATAGTGTTCAATTTCTGCGTTAATAGATTCACAGGTAGAATTCCTTCGTCTTTGCACAATCTCACCAACATTCAAGTTATTCGGATGCGTTCAAACCTTTTGGAAGGAACTTTGCCATCAGGTCTCGGAAATCTCCCCTTCCTTCGTATGTATAGTATAGCATATAATAGGATAGTGAGCTCAGAAGATAGAGGCCTAGACTTCATTTCTTCATTGGCAAATAGCACCCACTTGAACTTTCTTGCAATTAATGGCAATAGGTTAAAAGGTGTAATTCCAGAGACCATTGGAAATCTCTCTAAGGTTCTCTCAATGTTATTCATGGGAGGGAATCTTTTCCACGGAAACATACCCCCCTCGATAGCAAATCTTAGAGGCTTGAGTTTATTAGACTTGAGTCGCAACGCAATCTCAGGAGAAATTCCTTTCGAGTTAAGCCAACTGGAGGAACTGCAAGAGCTCAGTCTGGCCGGGAATCAGATATCTGGAAGTATTCCAAACTCCCTTGGCCGTCTCCAAAAGCTGAACAGACTTTATTTGTCAAGCAATCAGCTTGCGGGTGAAATACCTTCAAGTTTTGGGAATTTTCAGAGCATTCTCTCCATGGACTTATCTCACAACAAGCTTAATGGAAGCATACCTGGAGCAGTTCTAAGTCTCTCATCTCTGACCACTGTTTTAAACGTGTCTAAGAACTTTTTAAGTGGATCTTTGCCTCAAGAAGTAGGGAGTTTGATCAGAGTTTCTACCTTAGACTTCTCTGACAACATTTTAGTTGGTGAAATCCCCAGCTCAATAGGCAGTTGTCTAAGCCTAGAAAAGCTATTTTTGGCACGAAATATGCTTTCAGGTCCTATTCCAAAAGCTCTTGGGGCCATTAGAGGCTTGGAAATTCTAGACCTTTCAACCAACCAACTCTGTAGATCCATTCCTGTCGAACTTCAAAATCTAAAAGCCCTTCAGTTATTGAACCTTTCTTATAATGACTTAGAAGGAGTCATCCCCAGTGGGGGAGTTTTCACAAATCTCTCTTCTTTCCATTTTGAAGGCAATAAGAAACTATGTTTACTTTCCACATGTGCCAATCAAAGACATGGGAGAAAGACGCTCATAATTTATATCACCATAGCTATTGTGGCGACATTGATAGTATGTTTCACAATTGGCCTACTGTTGTATATGAGGAGCAGAAAATCAAAGGCAACGACACCATTTGAAATCCCAAAGCCAAATCATCCAACGGTCTCTTATGATGCGCTTCGACGAGCCACAGGGGACTTCAGCCCAGAAAATTTACTTGGAACCGGAAGCTTTGGCCGGGTCTATAGAGGCCATCTTGGTGAAGGGAGTATTAGTACTAGTGTTGCAGTAAAAGTACTAGATACTTTAAGGACAAGTTCCTTGAAGAGTTTCTTTGCAGAGTGTGAGGCTTTGAAGAATGAGAGGCATCGAAATCTGGTTAAGCTAATCACCTCATGTTCTAGTATAGACTTCAAGAACAAAGAATTTTTGGCTTTGACTTATGAGTTCATATGTAATGGAAACTTGGATGATTGGATTAAGGGAAAGAGACAGCGTGCAAATGGAAATGGGTTGAATCTTATGGAGAGACTGAACATTGCTATTGATGTTGCTTGTGCATTGGATTATCTGCACAATAACACTGAAAATCCTATTGTCCATTGTGATTTGAAGCCTAGCAATATTCTTCTGTGTGAAGATATGACTGCAAAGGTGGGAGATTTTGGGTTGGCTAGAGTGTTGATTGAAAGACCAACTAATCAAGTCTCAATATGTTCCACCCAGGTTCTCAAAGGTTCAATCGGTTACATACCTACAGATGATAGCTTCACAGGTGACTCAAGCTTAACAAGATGGGTTCAATCAGCATTCCCAGACAAGACTGTGCAAGTCATAGACCCTCAGCTTCTGTCACACATTTTTCACAATGAGCTTGCTGATAAAGATCCCAATGTACAACTTGATTGTGTGATTGCAATTTTGGGAGTCGGCTTATCCTGCACTGCAGATTCTCCAGATGGACGCCTAAAGATGAAAGATGCTGTTGCCAAATTACAAGTTGTCAGAGATAATCTTTCAAAACTCAAGCAAAACAAGGGCCCATCAAGCGTTAGTTTTGTTTAG 2973 0.4104 MGSFSQPSHYFALYIMPLAIHCLFLSISSSTALDITTDTEALISFKSHLSNIDTPHPLSSWNQSSSSPCNWYGVTCNRFGHRVIGLNLSSLRLSGQLSPYIGNLTFLKSLQLQDNQFEGVIPEQIGHLIRLRALDLSSNRIEGMLPSNITRLENLVTLNLSFNYIVSQIPQDIDSLTELRVLRLGSNRLYGDIPPTLGNVSSLTNISFGTNSLRGGIPSELGRLKDLIELDITINNLNGTIPSSIYNLSSMVNLAVAANDFWGDIPQDVGHKLPKLIVFNFCVNRFTGRIPSSLHNLTNIQVIRMRSNLLEGTLPSGLGNLPFLRMYSIAYNRIVSSEDRGLDFISSLANSTHLNFLAINGNRLKGVIPETIGNLSKVLSMLFMGGNLFHGNIPPSIANLRGLSLLDLSRNAISGEIPFELSQLEELQELSLAGNQISGSIPNSLGRLQKLNRLYLSSNQLAGEIPSSFGNFQSILSMDLSHNKLNGSIPGAVLSLSSLTTVLNVSKNFLSGSLPQEVGSLIRVSTLDFSDNILVGEIPSSIGSCLSLEKLFLARNMLSGPIPKALGAIRGLEILDLSTNQLCRSIPVELQNLKALQLLNLSYNDLEGVIPSGGVFTNLSSFHFEGNKKLCLLSTCANQRHGRKTLIIYITIAIVATLIVCFTIGLLLYMRSRKSKATTPFEIPKPNHPTVSYDALRRATGDFSPENLLGTGSFGRVYRGHLGEGSISTSVAVKVLDTLRTSSLKSFFAECEALKNERHRNLVKLITSCSSIDFKNKEFLALTYEFICNGNLDDWIKGKRQRANGNGLNLMERLNIAIDVACALDYLHNNTENPIVHCDLKPSNILLCEDMTAKVGDFGLARVLIERPTNQVSICSTQVLKGSIGYIPTDDSFTGDSSLTRWVQSAFPDKTVQVIDPQLLSHIFHNELADKDPNVQLDCVIAILGVGLSCTADSPDGRLKMKDAVAKLQVVRDNLSKLKQNKGPSSVSFV 990
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g0130 990 SMART serkin_6 703 971 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele31g0130 990 Pfam Leucine rich repeat 547 606 IPR001611 GO:0005515
Lele31g0130 990 Pfam Leucine rich repeat 107 165 IPR001611 GO:0005515
Lele31g0130 990 FunFam Leucine-rich repeat receptor-like protein kinase 35 195 - -
Lele31g0130 990 ProSitePatterns Serine/Threonine protein kinases active-site signature. 835 847 IPR008271 GO:0004672|GO:0006468
Lele31g0130 990 FunFam LRR receptor-like serine/threonine-protein kinase EFR 341 641 - -
Lele31g0130 990 ProSitePatterns Protein kinases ATP-binding region signature. 709 734 IPR017441 GO:0005524
Lele31g0130 990 SUPERFAMILY Protein kinase-like (PK-like) 680 968 IPR011009 -
Lele31g0130 990 FunFam LRR receptor-like serine/threonine-protein kinase EFR 674 786 - -
Lele31g0130 990 Pfam Leucine rich repeat N-terminal domain 37 77 IPR013210 -
Lele31g0130 990 SUPERFAMILY L domain-like 378 633 - -
Lele31g0130 990 ProSiteProfiles Protein kinase domain profile. 703 990 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele31g0130 990 FunFam Putative leucine-rich repeat receptor-like protein kinase family protein 234 340 - -
Lele31g0130 990 Coils Coil 961 981 - -
Lele31g0130 990 SMART LRR_typ_2 176 200 IPR003591 -
Lele31g0130 990 SMART LRR_typ_2 496 521 IPR003591 -
Lele31g0130 990 SMART LRR_typ_2 128 151 IPR003591 -
Lele31g0130 990 SMART LRR_typ_2 297 321 IPR003591 -
Lele31g0130 990 SMART LRR_typ_2 424 447 IPR003591 -
Lele31g0130 990 SMART LRR_typ_2 569 592 IPR003591 -
Lele31g0130 990 SMART LRR_typ_2 152 175 IPR003591 -
Lele31g0130 990 SMART LRR_typ_2 400 421 IPR003591 -
Lele31g0130 990 SMART LRR_typ_2 448 471 IPR003591 -
Lele31g0130 990 SMART LRR_typ_2 104 127 IPR003591 -
Lele31g0130 990 SMART LRR_typ_2 593 618 IPR003591 -
Lele31g0130 990 Gene3D Ribonuclease Inhibitor 340 640 IPR032675 -
Lele31g0130 990 Pfam Protein tyrosine and serine/threonine kinase 707 867 IPR001245 GO:0004672|GO:0006468
Lele31g0130 990 SUPERFAMILY L domain-like 36 335 - -
Lele31g0130 990 Gene3D Ribonuclease Inhibitor 97 339 IPR032675 -
Lele31g0130 990 Gene3D Ribonuclease Inhibitor 33 96 IPR032675 -
Lele31g0130 990 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 347 969 - -
Lele31g0130 990 Gene3D Transferase(Phosphotransferase) domain 1 887 973 - -
Lele31g0130 990 Gene3D Phosphorylase Kinase; domain 1 685 786 - -
Lele31g0130 990 Gene3D Transferase(Phosphotransferase) domain 1 787 886 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g0130 Lele-ChrLele31 1296369 1299586 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g0130 37 977 Receptor kinase-like Gene Family AT3G47570 39.579 0.0 637
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Lele31g0130 PK_Tyr_Ser-Thr 8e-29 CL0016