Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g0109 ATGCCAGGAAGTGGACAAGTGACAGTTCCTCCAGGTTTCCGGTTTCACCCAACAGATGAAGAACTTCTTTACTATTACCTCAGGAAGAAGGTCTCTTACGAAGCCATTGACCTTGACGTCATCAGAGAAGTTGATCTTAACAAACTTGAGCCCTGGGACCTCAAAGAGAAGTGTAGGATTGGATCGGGGCCACAGAACGAGTGGTATTTCTTCAGCCACAAAGACAAGAAGTACCCAACAGGGACAAGAACAAATAGGGCAACTACAGCTGGGTTTTGGAAAGCCACAGGAAGGGACAAGGCCATTTATCTCACTAACTCCAAGAGGATTGGCTTGAGAAAAACCCTTGTCTTCTACACTGGGCGTGCTCCTCACGGCCAAAAGACCGATTGGATCATGCATGAGTATCGTCTCGACGAACATGATGACCTCCACGTTCAGGAAGATGGGTGGGTAGTGTGTAGGGTTTTCAAGAAGAAGAACCTCAACAGAGGTTACCAGACACCAGAAATGGAAGAGGAAGAGTACTTAGCTTACCAAATGAGAACAACAAAAAGTGGATCAACCCATCAGCAGTTATTAGATCATCATCATCACATGCAAGCACTTTATGATCATCATCATCATCATAATAATAACTATAGCCAGCTTGATGGATCAATACACCTACCACAATTGTTCAGTCCTGAATCCGCAGCAGTACTATCAGCTGCCGGCGCCGCCGCCAGTTCTTCTGAAGTAGTCGAGTGCTCTCAGAACTTGTTGAAGCTCACAAACACAAGTAGTGGACTCAATCTTAATCTCAATCATTATAATGACGATCACTGGTCATTCTTGGACAAGCTTCTTGCTTCACACCACCACCACCACAGATATATGCCTTCTAATTCACATCTTGATCATCATGCTGCTTCTGTGGCTTCTTCAACCCAGAAATTCCCATCTGTTCATTACCTTGGCTGTGACACTACTCGTGACATTCTCAGGTTCGCCAAGTAG 999 0.4515 MPGSGQVTVPPGFRFHPTDEELLYYYLRKKVSYEAIDLDVIREVDLNKLEPWDLKEKCRIGSGPQNEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIYLTNSKRIGLRKTLVFYTGRAPHGQKTDWIMHEYRLDEHDDLHVQEDGWVVCRVFKKKNLNRGYQTPEMEEEEYLAYQMRTTKSGSTHQQLLDHHHHMQALYDHHHHHNNNYSQLDGSIHLPQLFSPESAAVLSAAGAAASSSEVVECSQNLLKLTNTSSGLNLNLNHYNDDHWSFLDKLLASHHHHHRYMPSNSHLDHHAASVASSTQKFPSVHYLGCDTTRDILRFAK 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g0109 332 SUPERFAMILY NAC domain 5 159 IPR036093 GO:0003677|GO:0006355
Lele31g0109 332 Pfam No apical meristem (NAM) protein 10 138 IPR003441 GO:0003677|GO:0006355
Lele31g0109 332 FunFam NAC domain-containing protein 18 163 - -
Lele31g0109 332 ProSiteProfiles NAC domain profile. 9 159 IPR003441 GO:0003677|GO:0006355
Lele31g0109 332 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 8 228 - -
Lele31g0109 332 Gene3D NAC domain 18 163 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g0109 Lele-ChrLele31 1059999 1062115 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g0109 1 285 NAC Transcription Factor Family AT1G79580 58.900 1.29e-114 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele31g0109 NAM 1.1e-37 No_clan