Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g0102 ATGTCATTAATAATTCATGTGTGTCATGTGGGTTTGGACATTGACCACAACACTGCTATTTGCCTGCTTCAGATTTTATTACATGCTCTCCATGAATTGAATTTAGTTCTTGCTGTCCTTGACACTTTGATTTAAAATTTCTTGAGGGCTGATTTATTTGAGATGAAAGATTTGCCAGTGGATGATCAGATTGACAAAGCATGTGGTTCCCCAAGGCATCTCAAAAAGCCAAACCAGCAAGCTGCAAAAAAGACATCTGAAACCCAGAAATTAGAATTACCCAGCAAGAAGACGATGATGTCTGCAAATCCTGATCCTCAAGCTACCTCATCTACAGGAACCACAGGCCTCACAAGGGGTCTTCCTTCGCCTTCAAGGACCACCAATAACCATGGCTATGGAAGTGGGAATTGTTCTCGTAGTGACAGCTTAGAAAGCACAAGTAGTGCTAGTGCACCCATTAAGCCACATACGGGAGGTGATGTAAGGTGGGATGCCATTAACATGGTTTCTAGAGGATCCCCTCTTGATCTTAGCCATTTTCGGCTTCTGAAGCGAATCGGCTATGGGGATATTGGGAGTGTGTATCTTGTTGAACTCAGAAGAACAAGGACTTATTTTGCCATGAAAGTGATGAACAAGGCAGCTCTTATAAGTAGGAATAAACTACTAAGAGCACAGACAGAGAGGGAGATTCTTCAACTTCTTGACCACCCTTTCTTACCAACTCTGTATTCTTACTTTGAAACTGATAAGTTCTATTGTTTGGTCATGGAGTTCTGCAGTGGAGGTAACCTTCACTCTCTTCGACAGAAGCAGCCAAACCAGCATTTCACAGAAGAAGCAGCACGGTTTTATGCTTCAGAGATATTGTTAGCTCTTGAGTACCTGCATATGCTAGGCATAGTGTATAGAGACTTGAAGCCAGAGAATGTGTTAGTCAGAGATGAGGGCCATATAATGCTCTCAGATTTCGATCTATCTCTTCGTTGCACGGTCAATCCTACGCTCATCAAGTCTTCATCTGCCCGTGTAAGTAGTAGCAGCAATAGCAGCAGTGGTGGTGGTTCTGGGATCATTTTGGATGACCAGCAAACAGTGCAGGGTTGTATCCAGGTCCAGCCATCAACTTTCTTCCCGCGTATTTTACCATCGAAGAAAAACCGAAAATCAAAGTCAGATTTCGGCCTCATAAACGGAGGAGCTGCCCTCCCTGAATTCATGGCAGAGCCTTCAGATGTGAGGTCAATGTCCTTTGTAGGGACACATGAATACCTTGCACCTGAAATCATCAGAGGAGAAGGTCATGGCAGTGCAGTAGATTGGTGGACTTTCGGGATCTTCTTGTACGAGCTTTTACACGGTACAACGCCCTTCAAAGGTGCCGGAAATAGGGCTACACTTTTCAATGTTGTAGGACAGCCCTTAAGGTTCCCAGACACTCCCCAGATAAGTTCTGCAGCAAAAGACCTTATCAAAGGATTGCTAGTGAAGGAACCTCCAAAGCGCATTGCATACATAAGGGGTGCCACAGAAATAAAACAGCATCCATTTTTTGAGGGAGTGAACTGGGCTCTAGTTAGAAGTGCCCTGCCTCCTCATATACCAGATCCTATAGATTTTACTAAGTATGCTAGCAACGAATCAGCAGAAAAGGTTATGGATATTGCAAAAGATAAAAACGGTCCAAAAGGTCCCTCTAATTCTTCTTACATGGATTTTGAGTATTTTTAA 1734 0.4343 MSLIIHVCHVGLDIDHNTAICLLQILLHALHELNLVLAVLDTLIXNFLRADLFEMKDLPVDDQIDKACGSPRHLKKPNQQAAKKTSETQKLELPSKKTMMSANPDPQATSSTGTTGLTRGLPSPSRTTNNHGYGSGNCSRSDSLESTSSASAPIKPHTGGDVRWDAINMVSRGSPLDLSHFRLLKRIGYGDIGSVYLVELRRTRTYFAMKVMNKAALISRNKLLRAQTEREILQLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNQHFTEEAARFYASEILLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCTVNPTLIKSSSARVSSSSNSSSGGGSGIILDDQQTVQGCIQVQPSTFFPRILPSKKNRKSKSDFGLINGGAALPEFMAEPSDVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGAGNRATLFNVVGQPLRFPDTPQISSAAKDLIKGLLVKEPPKRIAYIRGATEIKQHPFFEGVNWALVRSALPPHIPDPIDFTKYASNESAEKVMDIAKDKNGPKGPSNSSYMDFEYF 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g0102 577 SUPERFAMILY Protein kinase-like (PK-like) 178 546 IPR011009 -
Lele31g0102 577 SMART serkin_6 181 519 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele31g0102 577 FunFam serine/threonine-protein kinase D6PK-like 265 332 - -
Lele31g0102 577 MobiDBLite consensus disorder prediction 64 157 - -
Lele31g0102 577 Pfam Protein kinase domain 406 519 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele31g0102 577 Pfam Protein kinase domain 182 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele31g0102 577 PANTHER FLIPPASE KINASE 1-RELATED 83 545 - -
Lele31g0102 577 Gene3D Transferase(Phosphotransferase) domain 1 394 537 - -
Lele31g0102 577 Gene3D Transferase(Phosphotransferase) domain 1 265 332 - -
Lele31g0102 577 Gene3D Phosphorylase Kinase; domain 1 179 264 - -
Lele31g0102 577 MobiDBLite consensus disorder prediction 81 154 - -
Lele31g0102 577 FunFam Serine/threonine-protein kinase AGC1-7 412 537 - -
Lele31g0102 577 ProSiteProfiles Protein kinase domain profile. 181 519 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele31g0102 577 FunFam Serine/threonine-protein kinase D6PK-like 179 264 - -
Lele31g0102 577 CDD STKc_phototropin_like 179 540 - -
Lele31g0102 577 ProSitePatterns Serine/Threonine protein kinases active-site signature. 302 314 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g0102 Lele-ChrLele31 976992 980437 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g0102 135 577 AGC Kinase Gene Family AT3G12690 72.026 0.0 656
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Lele31g0102 Pkinase 4.2e-38 CL0016