Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g0088 ATGTTCCCTCCAAAGAAGGCTTCATCTATGAATTCTCAAGAGAGAGGCATGTGTGTTCAACCTGACTCTGGCCTCGTCCTCACCACTGATCCCAAGCCTCGCCTTCGCTGGACCGTCGAACTCCATGAACGCTTCGTCGATGCCGTCGCTCAGCTCGGAGGCCCTGACAAGGCAACACCGAAGACGATCATGAGGGTGATGGGTGTGAATGGTCTCACGCTTTACCATCTAAAGAGTCACCTTCAGAAATTTAGGCTTGGAAAGCAACCCCACAAGGACTTCAATGATCATTCGATCAAGGATAACATAGCAGGTGAGGTGACACTTCTTTCTAGGGTTCAGAAACATCTTCAGCTGAGGATTGAAGCTCAAGGGAAATACATGCAGAGCATATTAGAGAAGGCATATCAAACACTTGCAGGAGAAAATCTGAAGAACATTAATAATGGAGCTCATCATCATCATCATAATCAACAAGCCAATATGATCCCTGAAGATTTCAATTCTTCGATCCCTCTGAATACTAATTTCCCTTCGTTTCATGATCATCAGCTTGACATCTATGGTAGTGACCAACTCGACCATCATCTTCATCACCACCATCAGTTCATGCCAAATAGCAGCAACATTTCTGAAATTCTGGGCATGGGGATGAATAATCATAATAATAAGAACAAGAGGCCTTTTATTTGGAACAATGATGAGGATCATCTGGGAACTTCATCTTCGTGTATTGATACTGATGATCCTTTTAAGCAAGTTTCAATGGTGGATAGAACCTGCACCAGTTCTGATGAGAATAATAACATTAATAATGCTATTGATCCTATTTCAGCGATTTATGACACTAAGCCTTTGCTTCATCAAGTAGACGACACTTTAGGGGACACTATGACTGATCATAAGAAGCTTGCTGAAAGGCCATCGCAAAAAAGGGCACATTCCCTTCAACATGCAGACCAAAGGATGAGTACTATGATTAGTACTGGTACACCATTTTAG 1002 0.4261 MFPPKKASSMNSQERGMCVQPDSGLVLTTDPKPRLRWTVELHERFVDAVAQLGGPDKATPKTIMRVMGVNGLTLYHLKSHLQKFRLGKQPHKDFNDHSIKDNIAGEVTLLSRVQKHLQLRIEAQGKYMQSILEKAYQTLAGENLKNINNGAHHHHHNQQANMIPEDFNSSIPLNTNFPSFHDHQLDIYGSDQLDHHLHHHHQFMPNSSNISEILGMGMNNHNNKNKRPFIWNNDEDHLGTSSSCIDTDDPFKQVSMVDRTCTSSDENNNINNAIDPISAIYDTKPLLHQVDDTLGDTMTDHKKLAERPSQKRAHSLQHADQRMSTMISTGTPF 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g0088 333 Pfam MYB-CC type transfactor, LHEQLE motif 113 138 IPR025756 -
Lele31g0088 333 Gene3D - 31 89 - -
Lele31g0088 333 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 29 89 IPR017930 -
Lele31g0088 333 SUPERFAMILY Homeodomain-like 31 87 IPR009057 -
Lele31g0088 333 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 32 87 IPR006447 GO:0003677
Lele31g0088 333 MobiDBLite consensus disorder prediction 319 333 - -
Lele31g0088 333 FunFam Myb family transcription factor 31 89 - -
Lele31g0088 333 MobiDBLite consensus disorder prediction 303 333 - -
Lele31g0088 333 Pfam Myb-like DNA-binding domain 35 83 IPR001005 -
Lele31g0088 333 MobiDBLite consensus disorder prediction 303 318 - -
Lele31g0088 333 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 113 221 IPR044848 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g0088 Lele-ChrLele31 853029 854777 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g0088 1 313 G2-like Transcription Factor Family AT1G79430 48.034 1.61e-81 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lele31g0088 Myb_DNA-binding 4.1e-07 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele30g0076 30 836995 838779 Lele31g0088 31 853029 854777 hybridization