Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g0054 ATGATACTGGAACTCGTCCGCATTCAAATTCAGCCAGGATATGAGAAGAATTGGCTCAAGAGAACCACAGAAAATGTTGAGAGCATAGATCAATGCACTACGATTTTATTGATACCCGATTTAGCCATGAATAAAGTAGTTTTTAAGGTCCAGAAGCTCTATGCAATAAGTCCGTTGTCATCGGCCCTCTTATTATCGGTGGAAGAGGAAGAAGGAGAGAAGGAAGACGATGAAGAAGAAGGAAGAAGGAACGAGTCAACTGGATGTGTGCATCGTCTTAGCATTGGTGGACTTGTGGGGCTTGGAGCGGGATCTTTGTCTTTAGTTTCACAGTTGGGTTCTGAGATTGGTCACAAATTCTCATACTGCTTGGTTCATTACTTTTCAAATTCCACTGGCAAACTCAAACTAGCTGGGACCAAGAGTCGATTTGTCTGGTTTGTGATTCGTGCAAGCATTTCTGGTGAGAAGGAAGAATGGAGTTGTGCAGGCGACTATGTAAGTGTTATGGCAAGAAACAGAATCTATTCTTCAGGTTGCCGTAAATGCTCTCTCTTTGAAGCAATAAATATCCCACCAAAAACATTTTCTGTTCCATCTGCCATCATAAATAGAAGTGGTGTCCTTTGGCTCAGTGCATTAGCACCGCATCGAGAAGACTGGAGGGTGTTGGTGAAGGTGGATTGTGTTTTTCCTCGGACCGACTATGATTTCTATGGTGATGACCTTGGTTACCGAAGAAGGTCATGTCGTTGGATGCTAGGAGGCATGAGCATTGGAAACAAGAGAGTGGAGACAGGTTCGAAAAGGGAGGGGAACACACTAATTGATTTAGGGGCGATATGGTTTGTAATGGGTGGTGCTGACGTGTACTTGAAGCCTCATCATAACATATTCTTCCCTCAAGACGATTTCATTTGCTTAGCAATATTCCCGGTAGACAATGGATCAGGATTCGACTATGGGAATATTCCACAGGTTTCGTTTCGAGCAGTTACCATGGCTCTTACCTCATACTTCAACTGGGATGTTAGTCTTCTAGCTGATCTTAACCTAGAAGAGAGTTTCTTCCATGAAGCAACACCAGAAGAAGAACAAATCCTTCCATGTCCAAAACGGCAGAAGTACTTGCCGTATGATCAGAGTTTGATGATGGACTTGATGAATATTGCTCCAGAGAATAATGGTATGTTGGATAGGAATGTTGTTGTGCCGAATGTTCTAGAGTTTTATTTTGACATAGTGGGAAATGAGGAGAGTGTGGAGGCGGCGGCAGTGGAAGGAGGAGGAGGGAGGAAGAAGAACGAGAAGCCTACGACACAGAGCGTGGCGGCGAGGGAGAGGAGGAGGAAGATAACGGAGAAGACGCAAGAGCTAGGAAAGCTGGTTCCTGGTGGCTCAAAGATGAACACAGCTGACATGCTCCACGCTGCTGCTATGTATGTCAATTACTTGAAAGCTCAAGTTGCCATGCTTCAACTCATCAACACGCACCAGGAAGATAAGGTATTGCCTGTGAATAAAGAAATGCAGAAACTGGTTACTTGTTCAGTTGTTGAAGAAAAGATGTACATGGAAGAGAAATGCTTTGTTCCAAAAGAGTTTGTAACCACCTTGACAAATCATAAAGACATTCAATCAACACCTTCCATCCTTAAAGATCTCAATCAGCTCATTTCGACAGACAGAGATTAA 1695 0.4354 MILELVRIQIQPGYEKNWLKRTTENVESIDQCTTILLIPDLAMNKVVFKVQKLYAISPLSSALLLSVEEEEGEKEDDEEEGRRNESTGCVHRLSIGGLVGLGAGSLSLVSQLGSEIGHKFSYCLVHYFSNSTGKLKLAGTKSRFVWFVIRASISGEKEEWSCAGDYVSVMARNRIYSSGCRKCSLFEAINIPPKTFSVPSAIINRSGVLWLSALAPHREDWRVLVKVDCVFPRTDYDFYGDDLGYRRRSCRWMLGGMSIGNKRVETGSKREGNTLIDLGAIWFVMGGADVYLKPHHNIFFPQDDFICLAIFPVDNGSGFDYGNIPQVSFRAVTMALTSYFNWDVSLLADLNLEESFFHEATPEEEQILPCPKRQKYLPYDQSLMMDLMNIAPENNGMLDRNVVVPNVLEFYFDIVGNEESVEAAAVEGGGGRKKNEKPTTQSVAARERRRKITEKTQELGKLVPGGSKMNTADMLHAAAMYVNYLKAQVAMLQLINTHQEDKVLPVNKEMQKLVTCSVVEEKMYMEEKCFVPKEFVTTLTNHKDIQSTPSILKDLNQLISTDRD 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g0054 564 SUPERFAMILY Acid proteases 93 321 IPR021109 -
Lele31g0054 564 Pfam Xylanase inhibitor N-terminal 95 135 IPR032861 -
Lele31g0054 564 SMART finulus 442 491 IPR011598 GO:0046983
Lele31g0054 564 SUPERFAMILY Acid proteases 88 144 IPR021109 -
Lele31g0054 564 MobiDBLite consensus disorder prediction 68 87 - -
Lele31g0054 564 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 433 498 IPR036638 GO:0046983
Lele31g0054 564 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 436 485 IPR011598 GO:0046983
Lele31g0054 564 Gene3D Acid Proteases 64 137 IPR021109 -
Lele31g0054 564 Gene3D - 435 501 IPR036638 GO:0046983
Lele31g0054 564 Pfam Helix-loop-helix DNA-binding domain 441 485 IPR011598 GO:0046983
Lele31g0054 564 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 440 531 IPR045843 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g0054 Lele-ChrLele31 577852 589401 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g0054 354 562 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G30670 36.245 3.60e-29 114