Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g0037 ATGCCTCCTTTGCTACCTAATACTGGCTTAAATTACAGTCATCAACTTATAATTGGAAGAATATTGATGAAGGAAGGTGGTAGAAAACATGGTGCAATGTCGCCGTGTGCCGCGTGCAAGCTTCTCCGGAGGAGATGTGCACAGGATTGCCTCTTTGCTCCTTACTTTCCTGCGGATGAACCCCACAAATTTGCAAGTGTTCACAAGGTTTTTGGAGCTAGCAATTTCAACAAAATGTTACAGGAACTACCAGAGGAGCAAAGAAGTGATGCAGTGAGTTCAATGGTATATGAAGCAAATGCGAGGATGAGGGACCCAGTTTATGGATGTGTGGGGGCCATATCCTGTCTTCAGCATCAAGTTGATGTGCTCCAAACACAACTTGCTCTTGCTCAGGCCGAGCTTGTTCACATCAGAAACCACCAACCTTCTTCTTCTTCTCCCACCCAACCCCAATCCTCCTCTCATGACAACAAGTCTTCTCTTTTTGCCGTCGACAATGTCACCGAGTCCTTGTGGTCTTGCTAG 528 0.4621 MPPLLPNTGLNYSHQLIIGRILMKEGGRKHGAMSPCAACKLLRRRCAQDCLFAPYFPADEPHKFASVHKVFGASNFNKMLQELPEEQRSDAVSSMVYEANARMRDPVYGCVGAISCLQHQVDVLQTQLALAQAELVHIRNHQPSSSSPTQPQSSSHDNKSSLFAVDNVTESLWSC 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g0037 175 ProSiteProfiles LOB domain profile. 34 135 IPR004883 -
Lele31g0037 175 Coils Coil 114 134 - -
Lele31g0037 175 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 33 159 - -
Lele31g0037 175 MobiDBLite consensus disorder prediction 140 161 - -
Lele31g0037 175 Pfam Lateral organ boundaries (LOB) domain 35 132 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g0037 Lele-ChrLele31 378156 381950 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g0037 23 175 AS2 family AT1G31320 65.116 1.03e-64 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lele31g0037 LOB 6.3e-42 No_clan