Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g0036 ATGGATCGTATAATGGAAGAATTGAGGAGCACAGAGGAGTTTGACGAACTTCCGGGGTTTCGATTCCATCCCACAGATGAGGAACTCGTGAGATTCTACCTCAGAAGGAAGCTTGACAAGAAACCCATCAGCATCGAACTCATCAAGCAGATTGATATTTACAAATACGACCCTTGGGATCTTCCGAAAGCTAGTTGTATGGGAGGAGAGAAGGAGTGGTACTTCTACTGCAGAAGGGGAAGGAAGTACAAGAACAGCATAAGGCCGAATAGAGTGACGGGATCAGGGTTCTGGAAAGCAACAGGGATAGACAAGCCTGTGTATTCTCTTGCTGGAGACTGCATTGGCCTCAAGAAAACCCTCGTCTACTATCGTGGCAGCGCCGGCAAAGGCACCAAAACTGACTGGATGATGCATGAATTTCGCCTTCCCTCCAACAACGTCAATGACCCAGCTTCTAATAATAATCCCCAAGAAGCTGAAATTTGGACACTCTGTAAAATTTTCAAAAGAACAGTGACGCAAAGAAAGTGTACACCAGATTGGACACACTTGGCTGCAAAGCGTCGTTGCAGTGACAATAAGAACAGCAGATCAATGAGCATTAAAAATAGTAATGTGGAGTCTTGTAATAGTACTATTACTTATGATCAAGAAGCATATATCAACTTTGGCGGCAGCCCACCAGAGCAGAAGCCTGCAGTTGTTCATAACTACAGCACGAGCAATAATCATTATAATGATCAAAGAAATCATCATGTAAGCCACCATTTCAGTACTTCTTCTTCAATGGTGGCACAGCAGCCTCCTCATCAATTAACTGCGTCGTCATCATCACTATCTCCATCATCATCTTTGAGCTTCTGGGGAAACCAGCAGCAGGCTTCAAATGGCCTGTTTGCGTTTGAGAACTCATGGGATGAGCTTGAATCAGTCGTGCAGTTTTGCTCTTGA 954 0.4444 MDRIMEELRSTEEFDELPGFRFHPTDEELVRFYLRRKLDKKPISIELIKQIDIYKYDPWDLPKASCMGGEKEWYFYCRRGRKYKNSIRPNRVTGSGFWKATGIDKPVYSLAGDCIGLKKTLVYYRGSAGKGTKTDWMMHEFRLPSNNVNDPASNNNPQEAEIWTLCKIFKRTVTQRKCTPDWTHLAAKRRCSDNKNSRSMSIKNSNVESCNSTITYDQEAYINFGGSPPEQKPAVVHNYSTSNNHYNDQRNHHVSHHFSTSSSMVAQQPPHQLTASSSSLSPSSSLSFWGNQQQASNGLFAFENSWDELESVVQFCS 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g0036 317 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 17 267 - -
Lele31g0036 317 ProSiteProfiles NAC domain profile. 16 171 IPR003441 GO:0003677|GO:0006355
Lele31g0036 317 MobiDBLite consensus disorder prediction 256 279 - -
Lele31g0036 317 Pfam No apical meristem (NAM) protein 18 143 IPR003441 GO:0003677|GO:0006355
Lele31g0036 317 SUPERFAMILY NAC domain 11 170 IPR036093 GO:0003677|GO:0006355
Lele31g0036 317 MobiDBLite consensus disorder prediction 254 279 - -
Lele31g0036 317 FunFam NAC domain-containing protein 35 25 174 - -
Lele31g0036 317 Gene3D NAC domain 25 175 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g0036 Lele-ChrLele31 367328 368953 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g0036 6 213 NAC Transcription Factor Family AT5G39820 52.609 1.10e-75 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele31g0036 NAM 2.7e-35 No_clan