Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g0034 ATGATTCCTGCATCCGATAAGGGCAGGTTTTTTGCGTTTGGTCGTGTCTTCTCTGGTAAGGTCTCCACTGGTTTGAAGGTCAGAATCATGGGACCAAACTACGTCCCTGGGGAGAAGAAATACTTGTATGTTAAGAATGTGCAAAGAACTGTCATCTGGATGGGGAAGAAGCAAAAAACTGTTGAGGATGTGCCTTGCGGTAACACAGTTGCTATGGTTGGTCTGGATCAATTTATTACCAAAAATGCTACATTAACAAATGAAAAGGAAGTGGATGCCCATCCTATCCGAGTGATGAAGTTTTCTGTCTCACCTGTGGTACGTGTTGCTGTTCAGTGCAAGGTTGCATCTGATCTTCCGAAGCTCGTTGAAGGTCTCAAACGGTTGGCCAAATCGGATCCTATGGTGGTGTGTACTATTGCAGAGTCTGGAGAGCACATTGTTGCTGGTGCAGGAGAACTTCACCTTGAGATCTGTTTGAAGGACTTGCAAGAAGATTTTATGGGTGGAGCTGAGATTATAAAGTCTGACCCCGTCGTGTCCTTCCGTGAAACTCTTCTAGAGAGATCTTGCCGTACTGTGATGATCAAATCACCCAACAAGCACAACCGTTTGTACATGGAGGCAAGACCCACGGAGGAAGGGCTTGCAGAGGCAATTGATGAAGGCAAGATTGGACCCAAGAATCGTTCTAAAATATTGGCTGAAGAGTTTGGTTGGGACAAGGATCTTGCCAAGAAAATCTGGTGTTTTGGACCTGAGACCCTTGGACCTAACATGGTGGTAGATATGTGTAAGGGAGTGCAGTACCTGAATGAAATCAAGGACTCTGTTGTTGCTGGATTCCAGTGGGCATCAAGAGAAGGTGCAATGGCTGAAGAGAACATGAGTGGCATTTGTTTCGAAGTCTGTGATGTTCTTCGCGCCGATGCTATCCACAGAGGAGGTGGTCAGATCATTCCAACTGCAAGGAGAGTGTTTTATGCTTCACAGTTGACTGCTAAGCCGAGGCTTCTTGAGCCTGTTTACCTGGTGGAAATCCAAGCTCCCGAGCAGGCTCTTGGAGGAATCTACAGCGTTCTTAACCAGAAACGAGGACATGTGTTTGAGGAAATGCAGAGGCCTGGTACTCCACTCTATAACATTAAGGCATACCTGCCTGTGATTGAGTCTTTTGGGTTCTCAAGCACCTTGAGGGCTGCAACATCAGGGCAGGCTTTCTCACAGTTGATATTTGATCACTGGGATATGATGCCATCGGATCCACTCGAGCCAGGAACACAAGCTGCTCAGCTTGTTGCAGACATTCGCAAGAGGAAGGGCTTGAAGGAGCAGATGACTCCACTTTCAGCAGCATTCTTGTCATTTACTAGCCATACTGTGTAG 1386 0.4675 MIPASDKGRFFAFGRVFSGKVSTGLKVRIMGPNYVPGEKKYLYVKNVQRTVIWMGKKQKTVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRVMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTIAESGEHIVAGAGELHLEICLKDLQEDFMGGAEIIKSDPVVSFRETLLERSCRTVMIKSPNKHNRLYMEARPTEEGLAEAIDEGKIGPKNRSKILAEEFGWDKDLAKKIWCFGPETLGPNMVVDMCKGVQYLNEIKDSVVAGFQWASREGAMAEENMSGICFEVCDVLRADAIHRGGGQIIPTARRVFYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSSTLRAATSGQAFSQLIFDHWDMMPSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSAAFLSFTSHTV 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g0034 461 Gene3D - 333 442 - -
Lele31g0034 461 CDD EF2_II 1 88 - -
Lele31g0034 461 SUPERFAMILY EF-G C-terminal domain-like 340 451 IPR035647 -
Lele31g0034 461 FunFam Translation elongation factor 2 336 455 - -
Lele31g0034 461 Pfam Elongation factor G, domain IV 227 335 IPR005517 GO:0005525
Lele31g0034 461 CDD aeEF2_snRNP_like_IV 177 344 - -
Lele31g0034 461 Pfam Elongation Factor G, domain III 105 167 IPR041095 -
Lele31g0034 461 SUPERFAMILY Translation proteins 1 94 IPR009000 -
Lele31g0034 461 Gene3D Translation factors 1 102 - -
Lele31g0034 461 SMART EFG_C_a 337 426 IPR000640 -
Lele31g0034 461 SUPERFAMILY EF-G C-terminal domain-like 102 178 IPR035647 -
Lele31g0034 461 Gene3D - 188 332 IPR014721 -
Lele31g0034 461 SUPERFAMILY Ribosomal protein S5 domain 2-like 180 339 IPR020568 -
Lele31g0034 461 FunFam Translation elongation factor 2 1 102 - -
Lele31g0034 461 SMART EFG_IV_2 217 335 IPR005517 GO:0005525
Lele31g0034 461 Pfam Elongation factor G C-terminus 337 423 IPR000640 -
Lele31g0034 461 CDD eEF2_snRNP_like_C 340 419 - -
Lele31g0034 461 FunFam Translation elongation factor 2 187 335 - -
Lele31g0034 461 Gene3D Elongation Factor G (Translational Gtpase), domain 3 104 181 - -
Lele31g0034 461 FunFam Translation elongation factor 2 104 181 - -
Lele31g0034 461 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 1 448 - -
Lele31g0034 461 Pfam Elongation factor Tu domain 2 12 85 IPR004161 GO:0005525
Lele31g0034 461 CDD EF2_snRNP_III 105 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g0034 Lele-ChrLele31 359975 361360 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g0034 1 450 Eukaryotic Initiation Factors Gene Family AT1G56070 89.011 0.0 845