Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g0023 ATGGTGGAGGCCAAGTTGCCGCCAGGTTTCAGGTTCCATCCCAGAGATGAAGAACTTGTGTGCGATTACTTGATGAAGAAAGTCACACACTCTGTTGATTCCGATTCCACTCTCATGATGGACGTTGACCTTAACAAGTGTGAGCCTTGGGATATTCCAGAAAGGGCACGTGTGGGAGGGAAGGAGTGGTACTTCTACACGCACAGAGACAGGAAGTATGCGACGGGGGTCAGAACGAATAGAGCAACGGCATCTGGATACTGGAAGGCCACAGGGAAGGACAGGGCTGTGCTTAGGAAGGCCAAGGTGGTTGGCATGAGAAAGACTTTGGTGTTCTATCAAGGAAGGGCTCCCAAAGGCAAAAAGACTGACTGGGTCATGCACGAGTTTCGCCTTCATTCTCCCCTCCCTCATCTTTCTCATCATTCTTTCCCCAAGGAAGACTGGGTCCTGTGTAGGGTATTCTATAAGAACAGAGAAGAAGAAAGTGGAAAAGCTGACATGGGAAGCTGCTATGACGACGCCGGCCCTTCGTCTCTCCCTGAATTAATGGATTCTTACATCAGTTTCGATCAGCCTTCTTCTGCAGCACATCACCAACACCATCAATATGAGCAAGTGCCCTGCTTCTCCAACAATGCTTTATTCCCTCCTCCTCCTCCAACAAACCCTAACCCTAACCCTTACCCTAGCATCTTCAACCCCCATGATCACACCAACTTATTGGGTCCACCAAATGGAGTAGCAGCAGCCGCAGGATCATTTGCTCATGACTCCAAGGTTCTCAATGCTTTGTTGACACAGCTCACCAAGATGGAAACTCAGGAAGGATCGCCTTACTTATCTCAAGCGGCCATTCCCAATTATTTATGGAAAAAACACTGA 885 0.487 MVEAKLPPGFRFHPRDEELVCDYLMKKVTHSVDSDSTLMMDVDLNKCEPWDIPERARVGGKEWYFYTHRDRKYATGVRTNRATASGYWKATGKDRAVLRKAKVVGMRKTLVFYQGRAPKGKKTDWVMHEFRLHSPLPHLSHHSFPKEDWVLCRVFYKNREEESGKADMGSCYDDAGPSSLPELMDSYISFDQPSSAAHHQHHQYEQVPCFSNNALFPPPPPTNPNPNPYPSIFNPHDHTNLLGPPNGVAAAAGSFAHDSKVLNALLTQLTKMETQEGSPYLSQAAIPNYLWKKH 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g0023 294 ProSiteProfiles NAC domain profile. 6 157 IPR003441 GO:0003677|GO:0006355
Lele31g0023 294 SUPERFAMILY NAC domain 3 158 IPR036093 GO:0003677|GO:0006355
Lele31g0023 294 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 4 200 - -
Lele31g0023 294 FunFam NAC domain-containing protein 100-like 15 161 - -
Lele31g0023 294 Pfam No apical meristem (NAM) protein 7 132 IPR003441 GO:0003677|GO:0006355
Lele31g0023 294 Gene3D NAC domain 15 162 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g0023 Lele-ChrLele31 286474 289418 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g0023 1 291 NAC Transcription Factor Family AT1G56010 55.205 3.13e-108 315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele31g0023 NAM 4.1e-38 No_clan