Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g0021 ATGACCTGTTTTCCTGTATTATTTGGCAGAAGGTCACGTTCTTCAGCAAGGCTAGATCCAGACATTGAAAAAGAATTTTCAGGTCTTCACAATGTCAAACTTTATACATACAAAGAACTACGAAATGCCACCGAAGATTTCAGTCCTATTAATAAGATTGGAGAGGGTGGTTTTGGTTCTGTTTACAAGGGACGGTTAAAAGGTGGGAAAGTTGCCGCTATTAAAGTCCTTTCGGCTGACTCCAGACAAGGGGTGAGGGAATTCTTGACAGAGATTAAGGTGATCTCAGAAATAGAGCATAGAAATTTAGTTAAGCTATATGGCTGTTGTGTGGAAGGAAATCACAGAATATTGGTCTACAATTACCTCGAGAATAACAGCCTCGCACAAACCCTTATAGGTGGGCGACGTAGCAGTATCCAATTCAATTGGCGAACACGGTCTAGAATATGCATTGGGGTCGCACGTGGGATTGCCTATCTCCATGAGGAATATGCAATTGGAGGCAGGCTAACGCGAAAAGCTGATGTATACAGCTTTGGAGTCCTCCTTGTGGAGATTGTGAGTGGGAGATGCAACACTAACACACAATTACCAATTGAACAACAGTACATTCTAGAAAGGACATGGGATCTTTACGAGAGAAAGGAATTGGTAGCACTGGTAGATCAATCGCTGAATGGGGAGTTTGATGCTGAGGAAGCTTGCAGAATTTTTAAGATTGGCCTTCTTTGCACGCAGGATGATCCCAAGGTGCGGCCGTCCATGTCTTCGGTGGTGAACATGCTCACCGGCAGAATGCCTGTGGACGAGAGGAACATAACAAAACCAGCCTTGATCTCTGATTTTATGGACCTCAAAGTGAGGAAAAAACCAGTAAGTAATATTGACATGGGGACTCAGGCTTCATCTTCTTACCATTCATCCTCGGCCTCTTACAACCAGGATATTACTTTTTCATCAACTGTTTCAACCGCTGCAACTGCAACCTTCACCGCACGATATGATCGAAGCATTTAA 1020 0.4353 MTCFPVLFGRRSRSSARLDPDIEKEFSGLHNVKLYTYKELRNATEDFSPINKIGEGGFGSVYKGRLKGGKVAAIKVLSADSRQGVREFLTEIKVISEIEHRNLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGRRSSIQFNWRTRSRICIGVARGIAYLHEEYAIGGRLTRKADVYSFGVLLVEIVSGRCNTNTQLPIEQQYILERTWDLYERKELVALVDQSLNGEFDAEEACRIFKIGLLCTQDDPKVRPSMSSVVNMLTGRMPVDERNITKPALISDFMDLKVRKKPVSNIDMGTQASSSYHSSSASYNQDITFSSTVSTAATATFTARYDRSI 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g0021 339 FunFam cold-responsive protein kinase 1 18 122 - -
Lele31g0021 339 Gene3D Transferase(Phosphotransferase) domain 1 163 283 - -
Lele31g0021 339 Gene3D Phosphorylase Kinase; domain 1 19 122 - -
Lele31g0021 339 ProSitePatterns Protein kinases ATP-binding region signature. 53 75 IPR017441 GO:0005524
Lele31g0021 339 SUPERFAMILY Protein kinase-like (PK-like) 26 264 IPR011009 -
Lele31g0021 339 Pfam Protein tyrosine and serine/threonine kinase 51 165 IPR001245 GO:0004672|GO:0006468
Lele31g0021 339 Pfam Protein tyrosine and serine/threonine kinase 169 263 IPR001245 GO:0004672|GO:0006468
Lele31g0021 339 ProSiteProfiles Protein kinase domain profile. 47 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele31g0021 339 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 31 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g0021 Lele-ChrLele31 273538 275706 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g0021 21 332 Receptor kinase-like Gene Family AT1G53430 37.398 5.91e-67 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele31g0021 PK_Tyr_Ser-Thr 3.1e-20 CL0016