Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g0017 ATGTCTGCTGTGGCAGGTTCATATGGTTACATTACTCCTGAATATGCTTACACCATGAAGTTGACTGAGAAATGTGACATCTATAGCCTTGGGGTAGTTTTGTTGGAACTAGTCACCGGCTGTTCACCGGTTCAACCGCTGGAACAGGGCGGTGATTTGGTGACTTGGGTGAGAAGATCAATTCAAGCGGCAGTACTGACATTGGAACTATTGGACAAGCGACTGAATGAGTGA 234 0.4615 MSAVAGSYGYITPEYAYTMKLTEKCDIYSLGVVLLELVTGCSPVQPLEQGGDLVTWVRRSIQAAVLTLELLDKRLNE 77
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g0017 77 Pfam Protein kinase domain 2 49 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele31g0017 77 ProSiteProfiles Protein kinase domain profile. 1 77 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele31g0017 77 SUPERFAMILY Protein kinase-like (PK-like) 2 49 IPR011009 -
Lele31g0017 77 Gene3D Transferase(Phosphotransferase) domain 1 1 77 - -
Lele31g0017 77 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 2 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g0017 Lele-ChrLele31 255432 255749 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g0017 1 76 Receptor kinase-like Gene Family AT5G65700 58.442 1.60e-23 90.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele31g0017 Pkinase 7e-08 CL0016