Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g0016 ATGCCTCATGTCCTAAGTAGTTATTATTTTCCGAAAGAAGGTTTCACGTATCAGGATCTCTTGGAAGCCACTGGTAGTTTCTCAGAAGCTGCAATTATAGGAAATGGAGCGTGTGGCACAGTCTACAAGGCTATTATGGCTGATGGTGAGGTGATTGCTGTCAAAAAGCTAAATTCTTGTGGAGAAAGAGCAAATGTTGACAGAAGCTTTCTTGCAGAGATTTCAATCCTTGGAAAGATCAGGCAAAGCAATATTGTGAAGTTGTATGGATTTTGTTTTCATGAAGATTCTAGGATTCTCTTATATGAGTACATGGAAAACGGCAGCCTCGGAGAACAACTCCATTGA 348 0.4023 MPHVLSSYYFPKEGFTYQDLLEATGSFSEAAIIGNGACGTVYKAIMADGEVIAVKKLNSCGERANVDRSFLAEISILGKIRQSNIVKLYGFCFHEDSRILLYEYMENGSLGEQLH 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g0016 115 Gene3D Phosphorylase Kinase; domain 1 3 104 - -
Lele31g0016 115 SUPERFAMILY Protein kinase-like (PK-like) 6 115 IPR011009 -
Lele31g0016 115 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 1 104 - -
Lele31g0016 115 Pfam Protein kinase domain 28 113 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele31g0016 115 ProSiteProfiles Protein kinase domain profile. 27 115 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele31g0016 115 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 15 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g0016 Lele-ChrLele31 254874 255221 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g0016 10 115 Receptor kinase-like Gene Family AT5G65700 46.226 6.73e-26 99.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele31g0016 Pkinase 3.8e-17 CL0016