Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g0002 ATGGATGGGGTCAGCCCTGATAATGAAGCGGAACAGTCTCAGTGCAGAGACTTGGGCGTTGCATCCTCATCTTCAGCATCGACGGGGTTAGGATGGAGGCCCAGCCACCTTGGGTTTACTCCATATATATGCCAGGGTGAAACTTCGGATAATTCCCAAACTCTGCGTGTGGTTGTGAGGAAATCCCTGCTGGCAAGATTGACCAAGGAAATAGTTGAAACATACCAAATATGCAATCCGCAGTTCAAATATTCTGAAGAGCTAAATCCAAAAAGATATTTGACCAGCCCATCAGTTGGAGTGCTTAATGATGGCTATGATAATGTTAACTCCGACCTTATTCTGACAGTGAACTTTGTCTTGGTCAATTTAGAGAGAAATAGAAGATATCTTGTCAAAGATGTCCTTGGCCACGGGACATTCGGACAAGTGGCTAAATGTTGGGTTTCAGATACTAACAGCTATGTTGCTGTGAAAATCATCAAAAACCAACCTGCATACTATCAACAGGCATTGGTTGAAGTATCTATTTTGAACACGTTAAACAAGAAGTATGATCCTGAGGACAAGCATCACATTGTTCGTATATATGATTACTTTGTCTATCAACATCATTTGTGCATATGCTTCGAACTTTTGGACACAAACTTGTATGAGCTTATCAAGTTGAACCATTTTAGGGGATTATCTCTGAGTATTGTTCAGTTGTTCTCTAAGCAGATATTGCATGGACTGGCTCTATTAAAAGATGCTGGCATCATTCATTGTGATCTGAAGCCAGAAAACATTCTTCTATGTACAAGGGTGAAGCCAGCAGAAGTCAAGATTATTGACTTTGGATCAGCATGCATGGAAGATCGCACTGTCTACTCCTATATTCAGAGTCGATATTATAGATCTCCCGAGGTTCTTCTTGGATATCAATACACAACAGCTATTGATATGTGGTCCTTTGGGTGCATAGTGGCCGAATTGTTTCTTGGATTACCATTATTTCCGGGTGCTTCTGAATTCGACCTTTTGAGGCGGATGATTGAAATACTTGGAGGACAACCGCCTGATTATGTACTGAGGGAGGCCAAAAACACTAGTAAGTTTTTTAAGTGTATCGGGAGTCTCCAGAATGGAGAGAACAGTGATAGTCCGACCAATGGAAGAAGTTCTTATCAAGCATTGACTGAGGAAGAATATGAAGCTAGAGAGTTGAAGAAACCATCAATTGGGAAAGAGTATTTCAATCATATGAACCTTGAAGCAATTGTTACTAACTATCCCTATAGGAAAAACTTGCCAAAGGATGATATTCTTAAAGAGAGTCAAATACGATTGGCATTAATTGATTTTTTGAGAGGGCTAGTTGAATTTGATCCTGCAAAACGCTGGTCACCCTTCCAGGCTTCAAGGCACCCTTTTGTGACAGGGGAACCTTTTACTCATCCTTATGAGCCTCCTCCAGAGACCCCTCGTGTGCCGGTTGTTCAAGCTGTCAAAGTAGATCATCACCCTGGTGCAGGGCACTGGTTTGCTGCTGGTCTATCACCTAATGTTCCTTGCAAAAGTAGGCCGTCACTATATAGCAGCTTGCATTTCCAGATGGTGCAATATCCACCTGCTAACAGCTACGGCAGTGTAGGAAGCCATGGTAGCTATAATGATAGTGTTGGGCTTGGAAGTAGCTACGGCAGTTATGGAGAAAGCAGTAATATGTTTGCATACTATTCGCCTGTTGGGCCATGTGGAATTCATTTGCTTGGTCATGGGAGTACGTCAATGCTTGGAAATAGTCCTGATGCGAGGAGAAGAGTTATTCAATACCCTCCGGGGAATGGTCGAGGCATAAGCCCATCTGCTGGAACTTTCACTCATCTGCCCCTTGGTGCCAGTCCCTCACAATATACTCCTCCAAGTTCCTATGCACAAGTTTCAGCAAACTCTCCAGGGCACTATGGACCTACTTCTCCTGTAAGAGGCACTTCTCATGGATCACCATTAGGGAAGACATCTACAGTTAGCCAGTTTAACAGAAGAAAAAATTGGGGATGTTCTGGAAGTCCTCAAACTCAAGATATAACATTTTCTCCACATTGGCAAGGTCAATGTCCTGACAGCTCCATCCATGGTGAAGGAACAGCTCAAGTTCTTAGCAGCTCGCCATCTTATCTGCAATCACATACTGATGCTGCAAGCTGGAAGCAGCGAGGAGGTGGAGCTAATCAGAAAATGGCATGCTTGTTCATACAGAGTTCTAATTCAAGCTTGCAATCAACAGAATTGGGACATGACAACCCAGAGTCTTGCTTATCATTGCCTGATCCTGGTGATTGGGATCCTAATTATAGTGATGAACTACTTCTGCAAGAGGATAGTTCAGATGGAAGCTGCTTGGCAACTGAGTTTGGCAGAAGTATGAATATTGGTTCCACGGAACCATTGGTTGGATTTGGTAGGTTCAACCATGCCTCCAGCACAAGCTCTCCTATATCCATTCAGAGACAAAATGGACCGGTTCAAGCATATTCTAATGTAGAGATGGATAGCCCTCCAGCTCATGATATTCAAGCTGGATACATGCGCTCTATGTCTAAACCTTTTCATCTCATACCTCGTATTTTGCAAAATTCTCCTAGCCGTTTTGGTCTGCAACCTGTCCAAAGATTTGCCCATGGCAGACCCACTCAGTTCAGTGAGTGGAATCAAATTAAGGCCCAGGCTCCTCCTTCCAGTTTTGGCAGTGGAGGCCCCCGTTCTCCAAGAAATAGCTCGTTTGCCAATAGTATGACATGGGGGCGTAGAGTTAATCCTCCTGTCTCAAACATTCCTCCTGCATCCTATGCAAGGAAAGACTATGCAAGGATAGACTAG 2862 0.435 MDGVSPDNEAEQSQCRDLGVASSSSASTGLGWRPSHLGFTPYICQGETSDNSQTLRVVVRKSLLARLTKEIVETYQICNPQFKYSEELNPKRYLTSPSVGVLNDGYDNVNSDLILTVNFVLVNLERNRRYLVKDVLGHGTFGQVAKCWVSDTNSYVAVKIIKNQPAYYQQALVEVSILNTLNKKYDPEDKHHIVRIYDYFVYQHHLCICFELLDTNLYELIKLNHFRGLSLSIVQLFSKQILHGLALLKDAGIIHCDLKPENILLCTRVKPAEVKIIDFGSACMEDRTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIEILGGQPPDYVLREAKNTSKFFKCIGSLQNGENSDSPTNGRSSYQALTEEEYEARELKKPSIGKEYFNHMNLEAIVTNYPYRKNLPKDDILKESQIRLALIDFLRGLVEFDPAKRWSPFQASRHPFVTGEPFTHPYEPPPETPRVPVVQAVKVDHHPGAGHWFAAGLSPNVPCKSRPSLYSSLHFQMVQYPPANSYGSVGSHGSYNDSVGLGSSYGSYGESSNMFAYYSPVGPCGIHLLGHGSTSMLGNSPDARRRVIQYPPGNGRGISPSAGTFTHLPLGASPSQYTPPSSYAQVSANSPGHYGPTSPVRGTSHGSPLGKTSTVSQFNRRKNWGCSGSPQTQDITFSPHWQGQCPDSSIHGEGTAQVLSSSPSYLQSHTDAASWKQRGGGANQKMACLFIQSSNSSLQSTELGHDNPESCLSLPDPGDWDPNYSDELLLQEDSSDGSCLATEFGRSMNIGSTEPLVGFGRFNHASSTSSPISIQRQNGPVQAYSNVEMDSPPAHDIQAGYMRSMSKPFHLIPRILQNSPSRFGLQPVQRFAHGRPTQFSEWNQIKAQAPPSSFGSGGPRSPRNSSFANSMTWGRRVNPPVSNIPPASYARKDYARID 953
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g0002 953 Gene3D Transferase(Phosphotransferase) domain 1 211 473 - -
Lele31g0002 953 Gene3D Phosphorylase Kinase; domain 1 95 210 - -
Lele31g0002 953 MobiDBLite consensus disorder prediction 903 953 - -
Lele31g0002 953 SUPERFAMILY Protein kinase-like (PK-like) 125 494 IPR011009 -
Lele31g0002 953 MobiDBLite consensus disorder prediction 1 28 - -
Lele31g0002 953 Pfam Protein kinase domain 132 472 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele31g0002 953 ProSitePatterns Serine/Threonine protein kinases active-site signature. 253 265 IPR008271 GO:0004672|GO:0006468
Lele31g0002 953 ProSiteProfiles Protein kinase domain profile. 130 472 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele31g0002 953 MobiDBLite consensus disorder prediction 753 779 - -
Lele31g0002 953 ProSitePatterns Protein kinases ATP-binding region signature. 136 159 IPR017441 GO:0005524
Lele31g0002 953 MobiDBLite consensus disorder prediction 7 28 - -
Lele31g0002 953 MobiDBLite consensus disorder prediction 903 932 - -
Lele31g0002 953 MobiDBLite consensus disorder prediction 632 718 - -
Lele31g0002 953 CDD PKc_YAK1 130 472 - -
Lele31g0002 953 FunFam Dual specificity tyrosine-phosphorylation-regulated kinase 1A 93 209 - -
Lele31g0002 953 SMART serkin_6 130 472 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele31g0002 953 PANTHER DUAL SPECIFICITY PROTEIN KINASE 59 475 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g0002 Lele-ChrLele31 13440 42685 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g0002 129 358 MAP Kinase Gene Family AT3G18040 34.146 1.21e-30 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-YAK Lele31g0002 Pkinase 6.1e-50 CL0016