Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g1384 ATGGGAAGTGAGAGGCGACGGCACTGGGAGGACCAAAAGGTGCTTGACCCTGAGAAGTCTAACAACATAGCGATTTTGCTTAGGGTACTCAATGTGACTATTGATGAAGTATGCGAGGCCCTCAAGGAAGGTGACAATCCTTTTTGTCTCACATGTTCACTTAATGCTGTTCTCCGCTGCATTCCAATGACTGACTCTCACTCTAGGGCCTTTGTTTTGACTTTTCACTTAAGCAATTGGGATATGCTGGGAACAGAACTTCTTGAAAGTTTGTTGAAGATGACTCCAACCAAAGATGAAGAACGTAAGCTGAAGGAGTTCAAAGATGAATCAGCCTTCAAGCTTGGTTCAGCTGAGAAATTTCTTAAAATCGTTCTTGATATTCCTTTTGCATTTAAGAGAGTTGACGCGATGCTTTACATTGCTAACTTTGATTCAGAATCGGAATACCTTAGGAAGTCCTTTGAGACTTTGGAGGTGGCTTGTAAGGAATTGAGGAATAGCAGATTGTTTTTGAAGCTCCTTGAAGCAGTGCTGAGAACTGGAAATCGTATGAATGTTGGCACCAATCGTGGTGATGCTCATGCATTCAAGCTGGACACACTTCTGAAGCTAGTTGATATTAAAGGGGCTGATGGAAAGGCCAGTCTGTTGCATTTTGTTGTGCAGGAAATGGTCAGAACTGAAGGTTCTCGAATGTCTGGTGCCACGGAAAAGATCTTGCAGTCTACATTCCAGGATGAAGTTGAATTTAGGAAACTTGGACTCCAAGTTGTTTCAGGTTTGAGCGGGGAGCTCTGCAATGTAAAAAAAGCAGCTACAATAGATTCAGATACGCTTAGCAGTGATGTCTCTAAGCTGGCCAGAGGGCTTGCAAAAGTTGCAGAAGTTCAAAAATTGAATGGAGAGTCACCATTGAGAGAAACTAGCCAAAAATTTTCGGAGGCAATAAAAGGTTTCTTGAAGAAGGGAGAGGAGGAAATTGTTTCAATTCAGGCCCAAGGGAAGAATGCTTTCTCTTCAGTGAAGAAGCTAACGGAGTATTTCCGTGGAAATTCTTCCAAGGAAGAAGCTCATCCGTTTAGGATTTTTATGGTCGGGAGGGATTTCCTTTTAATACTTGATCGTGTGTGCAAGGAAGTTGGGAAAGTAAACGAGAGAACTTTAGTTGGTTTCTCAGAACCTTCAAATGCCATCCTGCTGCCAATTTCGCCTGAGATTGTTGGTTCCTTGGATGATGAAAACTCCTCGCGCTCGTCATAG 1263 0.4283 MGSERRRHWEDQKVLDPEKSNNIAILLRVLNVTIDEVCEALKEGDNPFCLTCSLNAVLRCIPMTDSHSRAFVLTFHLSNWDMLGTELLESLLKMTPTKDEERKLKEFKDESAFKLGSAEKFLKIVLDIPFAFKRVDAMLYIANFDSESEYLRKSFETLEVACKELRNSRLFLKLLEAVLRTGNRMNVGTNRGDAHAFKLDTLLKLVDIKGADGKASLLHFVVQEMVRTEGSRMSGATEKILQSTFQDEVEFRKLGLQVVSGLSGELCNVKKAATIDSDTLSSDVSKLARGLAKVAEVQKLNGESPLRETSQKFSEAIKGFLKKGEEEIVSIQAQGKNAFSSVKKLTEYFRGNSSKEEAHPFRIFMVGRDFLLILDRVCKEVGKVNERTLVGFSEPSNAILLPISPEIVGSLDDENSSRSS 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g1384 420 PANTHER FORMIN-RELATED 11 395 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Lele30g1384 420 Gene3D Formin, FH2 domain 3 389 IPR042201 -
Lele30g1384 420 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1 400 IPR015425 -
Lele30g1384 420 SUPERFAMILY Formin homology 2 domain (FH2 domain) 13 59 - -
Lele30g1384 420 Pfam Formin Homology 2 Domain 10 374 IPR015425 -
Lele30g1384 420 SUPERFAMILY Formin homology 2 domain (FH2 domain) 78 387 - -
Lele30g1384 420 SMART it6_source 17 389 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g1384 Lele-ChrLele30 15967733 15970381 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g1384 10 409 FH2 protein (formin) Gene Family AT3G25500 61.139 3.34e-161 479