Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g1383 ATGGCCAATATCACCATGCCATCAGCTTACGAGATTCTCCGTCTCCTCTCACTTTTCTTCTCCCTCGCCGTCACGCCCACTCTGTCTTCCTCCGCCACTCGCCGGATCCTCCATCAACCATTTTTCCCCAAGGACTCCATCCCTCCCGACTCCTCTCCCACTCCAATTCCAACACACAAGGCTTTTTTCCCTTCTTACCATTCCCCACAAAACCCTCCTTCTCCCACTGCTCCCGCCAACATCTCCTCCCAACTCTTCCCTCAGCCCTCTTCCCTCCACCGCCACCCAGTCATTGCGATCGCTGTGTCAGTCTCCCTCCTCTCCGGAGCTCTCATCGCCCTTCTTGTCTTCTTCATTTACTACCGTAAATACACCACTTCTGACAAGGTTTCGAGATCTGACAGTCTACGATTATACCCTCCAAACACTCTGATTGCCGATGCTATTGGTGGTCATAAGCCTCGCTCACCATCCTACACCAGTGCCGGCACTAGCTCCGAGTTTCTCTATATGGGCACTGTGGTAAATTCACGAGAAGCTTGTGGTCGGCCGGGCATGGGCACTTCTGCCGCACCATATCAAAAACTGGGGTCGCCCGAACTCAAACCGCTGCCGCCATTGCCGGGTCACAGCAACAGGGGGACTCGCGAACATGAAGAAGAAGAGGAGTTCTTCTCTCCAAGAGGGTCTTCAAGCCACAGAATGAGTCCTGTGCGTACTGGGTCGGGGAGAGTGCTTCGGTTGGGAATGAATAGACTTGGGATTGGGAGTAGAAGCTTCAATTCAACAACACCTTCTCACGCTTGCTCAGATTCTGCATCTCTCACTTGTTCCCCTTGTTTGAATTTGAGTCCCAGGCACACTTTGGAGCCTCGGCGCCCCATGACATCCTCCTCACCGTCTTCACCGGAGATTAAATTGGAATTTTCCAGTCCAGAACAGAGGAAGAATTCTGTAGCCACAATTGAGATAAATGTTCCAATCAAGAAGCCCCCATCTCCTCCTGCGCTTCCGCCTCCACGCTTTTGGGAAGCATCTCCGAATAACAATGACGATACTCGAAAGCCAAAGTTGAAACCTTTGCACCGGGATAAAGTTAGGGCCAGCTTGGATCGGGCCATGGTTTGGGATCAGTTAAAACCAGACATGGACACTCCCAGAAACGTTTACAAAGTAACCCCTCAAAACCTAGGATCAGATGTTGCAGCTAAAACTGCTGCAGCATTAGTAGCTTCTTCTTTGGTCTTCAAGGAATCCGACCCTTCATATTCCTCCAAACTTCTTCAAGAAGCCATCTAA 1299 0.5096 MANITMPSAYEILRLLSLFFSLAVTPTLSSSATRRILHQPFFPKDSIPPDSSPTPIPTHKAFFPSYHSPQNPPSPTAPANISSQLFPQPSSLHRHPVIAIAVSVSLLSGALIALLVFFIYYRKYTTSDKVSRSDSLRLYPPNTLIADAIGGHKPRSPSYTSAGTSSEFLYMGTVVNSREACGRPGMGTSAAPYQKLGSPELKPLPPLPGHSNRGTREHEEEEEFFSPRGSSSHRMSPVRTGSGRVLRLGMNRLGIGSRSFNSTTPSHACSDSASLTCSPCLNLSPRHTLEPRRPMTSSSPSSPEIKLEFSSPEQRKNSVATIEINVPIKKPPSPPALPPPRFWEASPNNNDDTRKPKLKPLHRDKVRASLDRAMVWDQLKPDMDTPRNVYKVTPQNLGSDVAAKTAAALVASSLVFKESDPSYSSKLLQEAI 432
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele30g1383 432 MobiDBLite consensus disorder prediction 328 342 - -
Lele30g1383 432 MobiDBLite consensus disorder prediction 64 85 - -
Lele30g1383 432 MobiDBLite consensus disorder prediction 283 358 - -
Lele30g1383 432 MobiDBLite consensus disorder prediction 212 228 - -
Lele30g1383 432 Pfam Glycosyl hydrolase family 9 375 431 IPR001701 GO:0004553|GO:0005975
Lele30g1383 432 SUPERFAMILY Six-hairpin glycosidases 376 432 IPR008928 GO:0005975
Lele30g1383 432 MobiDBLite consensus disorder prediction 185 245 - -
Lele30g1383 432 MobiDBLite consensus disorder prediction 291 321 - -
Lele30g1383 432 Gene3D - 364 432 IPR012341 GO:0005975
Lele30g1383 432 PANTHER FORMIN-RELATED 17 381 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele30g1383 Lele-ChrLele30 15964247 15966666 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g1383 75 380 FH2 protein (formin) Gene Family AT2G43800 31.436 1.02e-23 102