Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele30g1377 | ATGGGATCAAAGATTGCACGTGTTGAGTCCATATTTGCATGTGAATGCCGAGCATGTCTCAAACCAATTAGTGACCCGAGTGACCTGCTCTTAAACATGATTGAGGCCAACTACTGGTGCTTTTCCATGCTCAATAAAGGCATTGGGGCTGGGGGGTACCCTGGAGCACAAGGCTCTTCAGTTGTGCGTAAAACCCAGATGAAACTCCTTTCCTCTCTTTCTCCACCCTTCTCATACTTGCAACTCTCTTTGTTCATGCAACATCCCAAGAACCACGAATCCCACACGAGGAAGCCATGGTATCAAAGAGCAATAGGAATGGGGAACCTGTGGAAATCGATTTCCAAGACATTGGGCGCAGAAATTCCAAGCGGAAACGGGGGCCAAGTGGGGAGACCAAGTTCCAATGGCAGTAAGAACAAGCAGCAGCAGCTAAGAAAATGCACATCTCTGAAGGTGGCCACTTCCTTCACAAGGGCATGCCTCTGTGCGCCCATCTCTTCCTACAACGAGATCTTCAGAGCGGAGGTTCCTCCCAGGAGGAGCAACAGTTTTCCCAGACCAAAGCCATTACAGTCCAGCACCACTTGTTGTGTTGCCAGCGCCAGGCTCAGCACAGAGGGCAGAAGAGTTTTCAGGGGCAAATCATTGACCGATGACGTCCTCATGAGGAGGTTCGTGATCGAAGAAGAAGCAATGATGCAAATCAGAAGAAGGAATGAAATGGAAGTTATTAGGAGGAGAACATTTCGTGAGTCTTACGTGCTTTTGAAGGAGCGTGGGGGGGAGATTTTTGTTATGGTGACGAGATTATGGGATCAGAAGTGGCTGGAAGCTGGAAAAGTAATTTCAGCTGAGCAAGGGAACCCGATTCAAAGCAAGCAAGCTGCCCCCTCCCATATTAATATTTCCATCCAACAATCGTGTGCTTCTGGAAAGCAGACGCTGGCTGAACAATTCCGCTTCCCAACACCACCATACCTTCTACCTCCTCCCACCTTCTTCCAACGCCGCACAACTTCCCCAAAGTTGAATGAAGGATTTTGCATTTTGATTTCATTGTTTGCCGTTCGTGCCAATCAGCAGCCTGATATGGAGATGCTACGTCCTTGCTTGTTATCGCTTTGAAGAAACAGTAATGCCACTGACATGGGAAAGAAGGGAAGTTGGTTTTCCGCAATCAAGAGAGTTTTCAGTCACCATTCCAAGGAAAAGGTAGTCAATGATTCTGAAAAGAAAAATGCAAAAGAAAAGAAGAAGAAAGGTCTTGGAAAACTAAGGCATGGAGAGACAAATTCATTCATTCCCCTCTTCAGGGAGCCAAGCAGCATTGAAAAAATCTTTGGGGACTTCGAAAGAGAGCAACAATTACTAACTTTGAGGGGTCACACACCTCCTGAGCTACCCAAAACACCACCTTTCGTGCTTCCCAGAGATACTTATCCTAGGGCTCCTTCACCAAAGCCTGCTTCTCCAAGGGTTGCTTCTCCGAGAGCAGCATCTCCTAGGAGGATTGTTCATCACCATAGACCAGAACCAACGCTAAGAAACCACCATGCCTCAGCAACTAAGATCCAGTCTGCGTATAGAGGTTATATGGCTAGGAGGAGTTTTAGAGTTCTGAAGGGTCTGGTGAGGCTTCAAGGAGTGGTAAGAGGACAGAATGTGAAGAGACAGACAATGAATGCCATGAAATACATGCAGTTGTTAGTGCGGGTTCAATCTCAGATTCAATCCCGGAGGATCCAGATGTTGGAAAACCAGGCCCGATATCAAGCTGAATACAAGAATGGTAAAGAAGTGGCAAGTACCTTGGGCAAATTGACTTTAGGCCATGGGTCTGAGGCAGGTAACCATGAAGATTGGGATGACAGCTTACTGACAAAAGAGGAAATAGAGGCAAGTTTGCAGAGGAAGGTGGAAGCAATCATCAAAAGAGAAAGGGCAATGGCATACTCATATTCCCATCAGTTGTGGAAAGCCACTCCTACATTAACCCATACGCCGGAGTCAGATATGCGATCTGGGGGATTTCCATGGTGGTGGAACTGGTTGGAAAGGCAGGTGCCCGCAGCAAAACCACAAGGAAGCCAAGTCTTCAAGAATTTTCAACTCACACCTCCCAGACCATATTCTGAACAGAAGACTAGTCCACAACCTGCCTCAAGCACCCATAAGCAGCACCGCTATGGGTTTGATAATATGGATGCAGCCACACCAAAATCCACTAAATCAGCTGTAGGGTCATCAGCAAAACCAGCAAGAACCCCGCAAGCAAACAGCTCGAGCTTGCCAAAGTATTCGAGAGCAAGGGTGGGGGGAACTGATTCACCTTTTGATGTGCCACTCAAGGATGATGATAGCCTCACAAGCTGCCCACCATTTTCAGTACCGAACTACATGGCTCCAACCCTATCTGCCAAGGCCAAAGTACGGGCTAGTAGTAATGTAAGAGAGAGTTTTCCTGGGACTCCAAGCTCTGAATCAAAGAGGCGACTTTCATTTCCTCTTTCGCAAGGAATTGGATCCTTTAAATGGACAAAAGGGTCCTTGTTCTCAAGCAAGGATCCTAGGTCTCAAAGGATGTTAGATAAGAACCAGTCACTTCAATCTTTAGGAAACTTGAGTGTGGATTCAACCGTGTCTTTACCCGCAGGGGTTGGAAGGAAACCGTTTAACAGATTTGTGTGA | 2691 | 0.4701 | MGSKIARVESIFACECRACLKPISDPSDLLLNMIEANYWCFSMLNKGIGAGGYPGAQGSSVVRKTQMKLLSSLSPPFSYLQLSLFMQHPKNHESHTRKPWYQRAIGMGNLWKSISKTLGAEIPSGNGGQVGRPSSNGSKNKQQQLRKCTSLKVATSFTRACLCAPISSYNEIFRAEVPPRRSNSFPRPKPLQSSTTCCVASARLSTEGRRVFRGKSLTDDVLMRRFVIEEEAMMQIRRRNEMEVIRRRTFRESYVLLKERGGEIFVMVTRLWDQKWLEAGKVISAEQGNPIQSKQAAPSHINISIQQSCASGKQTLAEQFRFPTPPYLLPPPTFFQRRTTSPKLNEGFCILISLFAVRANQQPDMEMLRPCLLSLXRNSNATDMGKKGSWFSAIKRVFSHHSKEKVVNDSEKKNAKEKKKKGLGKLRHGETNSFIPLFREPSSIEKIFGDFEREQQLLTLRGHTPPELPKTPPFVLPRDTYPRAPSPKPASPRVASPRAASPRRIVHHHRPEPTLRNHHASATKIQSAYRGYMARRSFRVLKGLVRLQGVVRGQNVKRQTMNAMKYMQLLVRVQSQIQSRRIQMLENQARYQAEYKNGKEVASTLGKLTLGHGSEAGNHEDWDDSLLTKEEIEASLQRKVEAIIKRERAMAYSYSHQLWKATPTLTHTPESDMRSGGFPWWWNWLERQVPAAKPQGSQVFKNFQLTPPRPYSEQKTSPQPASSTHKQHRYGFDNMDAATPKSTKSAVGSSAKPARTPQANSSSLPKYSRARVGGTDSPFDVPLKDDDSLTSCPPFSVPNYMAPTLSAKAKVRASSNVRESFPGTPSSESKRRLSFPLSQGIGSFKWTKGSLFSSKDPRSQRMLDKNQSLQSLGNLSVDSTVSLPAGVGRKPFNRFV | 896 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele30g1377 | 896 | MobiDBLite | consensus disorder prediction | 695 | 728 | - | - | |
| Lele30g1377 | 896 | MobiDBLite | consensus disorder prediction | 738 | 768 | - | - | |
| Lele30g1377 | 896 | Pfam | Protein of unknown function (DUF4005) | 748 | 843 | IPR025064 | - | |
| Lele30g1377 | 896 | Gene3D | - | 516 | 569 | - | - | |
| Lele30g1377 | 896 | MobiDBLite | consensus disorder prediction | 466 | 492 | - | - | |
| Lele30g1377 | 896 | MobiDBLite | consensus disorder prediction | 693 | 790 | - | - | |
| Lele30g1377 | 896 | PANTHER | SERINE/THREONINE-KINASE | 80 | 250 | - | - | |
| Lele30g1377 | 896 | SMART | iq_5 | 517 | 539 | IPR000048 | GO:0005515 | |
| Lele30g1377 | 896 | MobiDBLite | consensus disorder prediction | 462 | 519 | - | - | |
| Lele30g1377 | 896 | MobiDBLite | consensus disorder prediction | 128 | 143 | - | - | |
| Lele30g1377 | 896 | ProSiteProfiles | IQ motif profile. | 518 | 546 | IPR000048 | GO:0005515 | |
| Lele30g1377 | 896 | MobiDBLite | consensus disorder prediction | 122 | 143 | - | - | |
| Lele30g1377 | 896 | Pfam | IQ calmodulin-binding motif | 519 | 539 | IPR000048 | GO:0005515 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lele30g1377 | Lele-ChrLele30 | 15915550 | 15926113 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lele30g1377 | 384 | 896 | IQD Protein Family | AT3G59690 | 51.250 | 5.26e-154 | 461 |