Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g1373 ATGACGGCCAGCTCCTTCTGCAATGCTGACTCTGTGTTCTCGAGAGAAGAAGGCGTAGATATTAGAAAGATGATGGAACCAAAGAGGAGCCTCTGCTCTGTGGATCAGAGCAATTATACCTCTATTGCATCTAAAAGACATAAGGCTGATTTATCCATCTCCACAAAGGAGGGAAAGGAGAAGATCGGGGAACGAATTGTTGCCTTGCAGCAGCTCGTTTCTCCATTTGGGAAGTCAGATACAGCTTCGGTACTTTTAGAGGCAACTCACTATATAAGGTTCCTTCATAAACAAGTTAAGGTGCTTAGTGCTCCTTATCTGCAACGCTCTCCTACAAGCAAAGCGCAGGATATAGAGGCGTACAGCCTGAGGAGTAGAGGATTATGTCTGGTTCCAGTGTCGTATACGATTGGAGTTGCCCAGAGCAATGGTGCAGATATATGGGCCCCCACCAAAAACGCATTGTCACAATTTGACTAG 480 0.4583 MTASSFCNADSVFSREEGVDIRKMMEPKRSLCSVDQSNYTSIASKRHKADLSISTKEGKEKIGERIVALQQLVSPFGKSDTASVLLEATHYIRFLHKQVKVLSAPYLQRSPTSKAQDIEAYSLRSRGLCLVPVSYTIGVAQSNGADIWAPTKNALSQFD 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g1373 159 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 46 95 IPR011598 GO:0046983
Lele30g1373 159 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 39 136 - -
Lele30g1373 159 FunFam Transcription factor bHLH113 family 45 121 - -
Lele30g1373 159 Gene3D - 43 116 IPR036638 GO:0046983
Lele30g1373 159 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 59 109 IPR036638 GO:0046983
Lele30g1373 159 CDD bHLH_AtbHLH_like 52 103 IPR045239 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g1373 Lele-ChrLele30 15876283 15879258 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g1373 24 156 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G05710 56.774 9.36e-57 173