Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g1323 ATGGATCCAATAAGATCAATGGAAGACCAGTTCTCCAAGTTGCATCCATCCTTGCCAGTAAACACTAGAATAGGAATAGTCGGGGGTGGTCCAAGCGGCTTGTCAGCTGCTTATGCATTATGCAGGCTTGGTTATAAAGACGTGACTGTGTTGGAGAAGCATCACACGGTAGGTGGCATGTGTGAATCAGTGGAAATTGAAGGGAAAGTTTATGACTTGGGCGGGCAAGTTCTTGCTGCAAGTAGCGCTCCTGTCATTTTTCACTTGGCAAAAGAGACAGGGTCTACTCTAGAAGAAATGGATTCCCACAAGCTAGCTGTTATCGAGCGTTCTACCGGAAAATATCAAGATATTAACGTTGCGGATGATTACGTATCTGTGATATCACTTACCCTGGAAATCCAAGAAAAGGTAAAGAATTCTGATCGTATTGGAGTCCACGCTGTTAGTGAAGTCGCTTCAGATTTAAGTCCAGCTTATATTGAGCGACATGGACTCAAATGTGTTCCTAAATCCGTAGCCTATGGTTACGTTGCTTCAGGATATGGGTTTGTTCAAGATATGCCGTACGCGTATCTTCATGAATTTACAAGAACGTCAATGGCTGGGAAAATTAGACGTTTTAAAGATGGATATACAAGTCTTTGGCAGAAGATTGCTGAATCACTTCCACTGAAACTTCAGTGCAACACTCAAGTGTTGGCCGTCAGACGCAACTCTGAAGGTATCACTGTTAATGTCAAGAATTCTGATGAAGTTAAAACAATGGAGTTTGACAAGATTATAATCTCGGGAAACTTTCCGTTAAAATATGGAAGAACTTATAGATCACCACCGTCAGCTTGCATAGAGCATAAAACGGAAGTCATGGATGTCAGTGATCTTGAAAGGGATTTATTCAGCAAAGTAGAGACAAATGACTACTACACTACGGTTTTGAAGGTTAAAGGGCTCGAAGATATGCCTGTTGGATTTTATTATCTTACTGAGTTTATGGAAGATCCCAGCACAATTGGAAATCCAGTTGCGTTGCAGAAATTCTATGCTGACACTGATATATTCTTGCTATGGTCATACGGCAACTCTGATGACATTAAGGGATCAGTTGTCGCTAAGCTTGCGATCGATGCAGTAGAAGCCATGGGAGGAAAAGTTGAGAATATTATTCTTCAACGTCGTTTTAAGTATTTCCCTCATGTTAGCAGTCAAGATATGAAAGACGGCTTCTATGACAAATTTGAATTAGAACTTCAAGGTTCCAGGAATACTTACTATGTAGGTGGACTTGTGGCATTTGAGCTTACAGAGAGAAATTCATCTTATGCTATGGCTTTAGTCTGCAAAAACTTTGGGACTAACAATGATCTGCCAATGTTTCCTTACACTAAGAGTTTGTTCCCCTTGCAAATGAAAGGCATGGAAAAAGATCCAAAAGAATTAGGCGAATTGCCAGGAATACAATTTCCTGACTTGCCTAATTTAAGTAGCTATTTGAAATACTGGGGAACTCATTCTATCACTCAAAACAAAACTCTCTACACTTGGATTAATGAAGAAGGGGCTATGATGGGCCAAAGGACCTATGGAGAGCTTTACTCAAATGCCAATTGTATTGCTCAAAAGCTCTTAACAAGCCAAAAACCATCTATCAAACCTGGAGACAGGGTTTTAATGATCTACGTGCCTGGTTTGGATTTCATTGACGCCTTCTCTGGATGTCTTAGAGCTAAAGTCATACCAGTGCCTGTTCTTCCCCCAGATCCCATGCAACGAAGTGGGCAAGCACTTATGAAGATTGAAACTATTGCTAAATCATGTGGCATAGTAGCAATTCTGTCAACAACAGCTTATCATTCAGCAGTCCGTGCAGGCTCAGTGAAAAATTTAATCTCGCTAAGTGGAAAAGGTGGGAAGACTTCAGCTCGGTGGCCTAATCTGCCATGGCTGCACACTGATAGCTGGGTCAAGAACTCCAAGAACCTGAGTATGGAATGTCTAGCCAATCAATCTGAGTCCGAACCTAATGATATCTGCTTTTTGCAGTTCACATCAGGATCGACTGGTGATGCTAAAGGAGTAATGATAACTCATGGGGGGCTGATTCATAACGTGAAGTTTATGCGAAGACAATATAAAAGCACCTCAAGAACAGTACTAGTAAGCTGGCTTCCTCAGTATCATGATATGGGGCTTATTGGCGGACTCTTTACATCTCTTGTTAGTGGTGGTACAGCTATTCTCTTCTCTCCATTGACATTTATCAAGAAGCCACTTTTATGGCTTGAAACTATCAGCAAGTATCAAGCAACTCATAGCGCTGGCCCTAACTTTGCTTTTGAGTTATTGATTCGAAGGCTAGAGTCTGACAAAGATAAGCTTCAGAATTTAGACCTTTCGTCTATGATTTTTCTCATGGTTGCAGCTGAGCCAGTGAGACAAAAGACTATGAAAAGATTTATTGAGCTAACTAGTCCTCTTGGCTTATCTCAGAAGGTGATGGCTCCGGGATATGGCTTAGCAGAAAACTGTGTGTTCGTTAGTTGTGCATTTGGAGAAGGTTACCCTATTATTGTTGATTGGCAAGCAAGAGTTTGTTGCGGGTACGTTCACCCAGGGGATGCAGATGTAGACATTAGCATAGTTGATCCAGAGACAGGTGAAGAGCTTCTAGAAGATGGAAAGGAGGGAGAAATATGGATTAGTAGTCCAAGTGCAGGAATAGGATATTGGGGGAAGGAAGAATTGAGTCAAAAAACTTTCAGGAATGAGCTTCAAAATCATCCTGGACGTAATTACACAAGAACTGGAGATTTGGGACGAATAATAGATCAGAAGTTGTTCATCACTGGCAGAATCAAGGATCTTATCATTGTTGCTGGAAGAAATATTTACTCAGCAGATGTTGAAAAAACAGTTGAAAGCTCATCTGAGCTTCTTCGTCCAGGGTGTTGTGCTGTCATTGGAGTTCCTGAGGAAATTCTATCAACAAAGGGAATTTCCATTCCAGATGGTTCCGACCAGGTTGGCCTTGTTGTGATTGCAGAAGTAAGAGACGGTAAACCAGTTGGCAAAGATATGATCCAGCAAATTCAAACTCGTGTGGCAGAAGAACATGGAGTCACTGTTGCTTCAATCAAGTTGGTCAAGCCCAGAACCATTAGTAAAACGACCTCAGGAAAGATCAAGAGATTTGAATGCTTAAAGCAATTTACAGATGGAACATTGAACTTGGCACCGCAACCACTTTTGACAGAGAAAACATTAAGACGATCATTCACTACAGGAACATGTAGAGAAGGACATACACCTCGACCCCAACTGGGGTCAAATAAAAATCTAAGCGGTCCAAGAATCAGCAACGTACAAATTTTGGAATTCTTGAAGGGGCTTATTTCTGAGCAGACAGGTATTTCAATTGACAGCATCTCAATGACAGACAACCTAACATCATATGGAATTGACTCAATAGGTGTGGTCAAAGCAACTCAAAAGCTCTCTGATTTCTTGGGAGTGCCAGTGGCAGCTATAGACGTCTTCACTGCGTCCTGCATTCAAGAGTTGGCTAATTTCTCAGAGAATCTTCTATTGAAGTCTCAACCTCAACTTGTGAACGATAAATCCCATGTTGCAGAACTTGAGATTGATTCTTCTGAATTGATTGTGGATGTTACCAAATCTCGCCAACTTGGTATTCGTTTCCTCCAGCTCCTAGCACTCATTTATATGTCTACCATTCTAGTTTTTCCTGCATATCTCTCAATCACTACCTTTCTCGGATTCATCCAAAGTTTTAGTGAACCAGTAGATGGGATACCCTGGTTGAATTATTTAATTTCCTTGACTTTTGCACCTCTTGCTTGGATCCTTTGCATGGTTTCCACTTGTATTTGCATTTCATTGTTCGGGACTTCTTTCCTGAGGCCAAATTATACCCTTGCCCCTGAAATTTCCATTTATTCTGTGGATTTCATCAAGTGGTGGGCACTTTATAAAATGCAAGAAATTTCTTCTAAAGTTCTGGCGGTGCATCTTCGAGGTACAATATTCCTGAAATATTGGTTTGAGATGCTTGGTGCAAGGATTGGATCTGCAGTTTTGTTGGATACAGTTGACATCACAGACCCATCACTTGTTTCAATTGGAGACAAAGCTGTTATTGCAGAAGGAGTTTTGCTCCAAAGCCATGAGGTGAAGAATGGAGTTGTAAGTTTCTTCCCGATTAGGATCGGCAAAGGTTCTTCCATTGGGCCTTATGCTGTTTTACAAAAAGGAAGTGTTGTTGGAGAAGGCACTGAGGTGCAACCTCTGCAAAAGGTTGAAGCAGGCCAACATGTGCTCAAAATGGCAAGGCTTAACAATTTTAATAAGAATGTAGTACTGCCTGTTGATACCAGTGAAGCTGAATCTGCTGCTATAAACCATTTCATTGGAATCTATCTGATTGGTTTTCTGAATTCCCTTGCTGCTGCTGTTGTGTACTTCCTATACATAAGGTTCTTCTCAAAAACCCCATCATTTCAAGACTTCTCATTTATTTGCCTATCAGGGGCCTTCCATTGGATCCCATTTACCATCACAGCATATGCCACCATGTTTTCTAATGTCCCATCAAGTCCCATCATCTTCGCCATTTCATTTTCTTGTGCCTACTTGCTTCATGGTCTTATTCTCAGCTCTCTCACTTGCTTTTTAACTCGACTCATGGGATTTAGTCAAAAGCAAACCCATTTCAAAATCTGGCTTCAACATAGAATCACCATTGCTTGCCACCTGAGATTTGCAAAGCTTTTAACAGGAACAGAAGCCTTTTGCATGTATTTACGCCTTTTAGGTGCCAAAATTGGCAAGCATTGTTCCATTAGAGCCATCAACCCAGTTTCAAACCCAAAATTAATGTCGGTTGGTGTTGGGGCCCATCTCGGTGATTTTTGTCGGATAATTACCGGGTTCCATTCTTCTCATGGGTATGTTAGTGAAAAAGTCAAGATTCAGGATAATTCAGTTGTTGGGAGTCAAAGCCTAATCCTCCCTGGTTCAACCATTCAAAAGAATGTCATTCTGGGTGCACTTTCAATTGCTCCGATGAATTCTACGCTCCAAGAGGGCGGTGTGTACATTGGATCTCAAACTCGAGTTGCTAATAGAAACTCTATAAATGCTTTGGATGAACGGATAGAGGAGATGGACATGGAATACAAGAAATTGGTGTCCAATTTGGCTGCAAATTTGGCTGTTACAACTTTGAAAGCTAAAGCAAGATATTTTCATCGCATTGGGCTTAGCGGAAAGGGATACCTAAAACTATACAACAAGATAGAAGGCTTTCCACTGCACAAGATCTTTCATCCTGGAAAAACATACCCTATCATTGTTCGGCACAGCAATAGTTTGAGTGCTGATGACGATGCAAGGATCGATGCTCGCGGTGCAGCTTTGAAGATACTCTCTGAAGGACCTACTTCTGAGTGTTCTATCTATGACTTAACACTTAAAACAGGCAATGCATTCTATGCTCGCACTATTGCTGATTTCACAAACTGGCTTGTTTGTGGGCTTGATGCAAGAAAGGAGTTTGTCAAGCGAGTCCCACATGTTCGTGACGCAGTGTGGAATTCTCTTCGGAATGCGAACTCTTACGCCGAATTGCATTACTATTCAAACTTTTGTCGGCTAATCCGCTTCACAGATGGACAGGAAATGTATGTGAGGTTCAAGTTGCGGCCTTCTGACAAAAGTATTAGTGAAGATTCAGGCAAGGTAGAGCCACAAGGGATCCTTCCACCGGAGACAGGTGCTATTCCTAGGGATGAAAATGATACACGCCCTCTACTTTTTCTTGCTGATGATTTTGAAAAACGCGTGAATTCTCCAAGTGGGGTTCAATACATTCTTCAAGTACAACTCCAACCAATACCAGATGATGAAGCCTCTCGTGACATTGCGCTAGACTGCACTAAACCATGGGATGAGAATAAGTTCCCATTCATTGATGTTGGAGAGATAAACATCAATCAAATACTTCCTGCTGAGGAATCAGAGAGACTAGATTTTAATCCCTATCTTCGAAGCTATGAACTTGATGTCATCCACGCTACTTCGAGCTCCCAAAGTGCATCAATTGATCACGGCCGTTCCTTGATCTATGAGATTAGTCAGAAGCTACGAAATAAAGAGCCGCTCCCAGAGGCCTTAAGGAACTTTATTGAGCAATCTGATGTGAAGGTAGATCTATCAAAATGTCCCATGGCAGCTCCCGCGTCACAAAAAGACGAGTTCCAAGAAGTGAGCTTGACCAGAACACGGTATCAAACCTTGTCAGCAATTTTCATTCAACCATTGCTACAAACCAGTTTGCCTTATTTAGTGGTGGGGTTAGCAATTTTCGGTCCTTTGAATTGGGTCGTTCAACAAAAGAACGCCAAGAAACTCCCAGTCCATTGGTTGCTTCCTCTGTGTTGGGTTTTCTCGGGTATTGTGGCAGCATTGGCATGTGTTGTTGCCAAATACGTGCTTGTGGGAAGGAAGAAAACCGGTGAAACAGTGGCCATATGGAGTCAGAGGGTAACAATGGATAGCACATGGCAGGCCATTAGAACTGTGGTTGGAGATTATTTCATGGACATGACAAGTGGTTCATTCTGGTTCGTGGTGTGGATGAAGTTGATGGGCGCAGAGGTAGATACAGACCGTGAGGCCTACGTGGACAGCGCGGGAGTATTATTGAACCCTGAAATGGTGAAGATTGGGAATGGAGGATGTGTGGGAAGAGAAGCTTTGTTCTTTGGGCACATATATGAAGGAGAAGGCAGCATGGTGAAGTTCGGAGAGATTAACATCGGAGAAGACGCATTTGTCGGAAGTAGAGCTGTTGTGATGCCCGGCGTGCAGGTGGAAGATGAGGGTAGCCTCGGCACACTGTCTCTTGCCATGAAAAGAGAAATCATCAGGTCTAAATAA 6957 0.4212 MDPIRSMEDQFSKLHPSLPVNTRIGIVGGGPSGLSAAYALCRLGYKDVTVLEKHHTVGGMCESVEIEGKVYDLGGQVLAASSAPVIFHLAKETGSTLEEMDSHKLAVIERSTGKYQDINVADDYVSVISLTLEIQEKVKNSDRIGVHAVSEVASDLSPAYIERHGLKCVPKSVAYGYVASGYGFVQDMPYAYLHEFTRTSMAGKIRRFKDGYTSLWQKIAESLPLKLQCNTQVLAVRRNSEGITVNVKNSDEVKTMEFDKIIISGNFPLKYGRTYRSPPSACIEHKTEVMDVSDLERDLFSKVETNDYYTTVLKVKGLEDMPVGFYYLTEFMEDPSTIGNPVALQKFYADTDIFLLWSYGNSDDIKGSVVAKLAIDAVEAMGGKVENIILQRRFKYFPHVSSQDMKDGFYDKFELELQGSRNTYYVGGLVAFELTERNSSYAMALVCKNFGTNNDLPMFPYTKSLFPLQMKGMEKDPKELGELPGIQFPDLPNLSSYLKYWGTHSITQNKTLYTWINEEGAMMGQRTYGELYSNANCIAQKLLTSQKPSIKPGDRVLMIYVPGLDFIDAFSGCLRAKVIPVPVLPPDPMQRSGQALMKIETIAKSCGIVAILSTTAYHSAVRAGSVKNLISLSGKGGKTSARWPNLPWLHTDSWVKNSKNLSMECLANQSESEPNDICFLQFTSGSTGDAKGVMITHGGLIHNVKFMRRQYKSTSRTVLVSWLPQYHDMGLIGGLFTSLVSGGTAILFSPLTFIKKPLLWLETISKYQATHSAGPNFAFELLIRRLESDKDKLQNLDLSSMIFLMVAAEPVRQKTMKRFIELTSPLGLSQKVMAPGYGLAENCVFVSCAFGEGYPIIVDWQARVCCGYVHPGDADVDISIVDPETGEELLEDGKEGEIWISSPSAGIGYWGKEELSQKTFRNELQNHPGRNYTRTGDLGRIIDQKLFITGRIKDLIIVAGRNIYSADVEKTVESSSELLRPGCCAVIGVPEEILSTKGISIPDGSDQVGLVVIAEVRDGKPVGKDMIQQIQTRVAEEHGVTVASIKLVKPRTISKTTSGKIKRFECLKQFTDGTLNLAPQPLLTEKTLRRSFTTGTCREGHTPRPQLGSNKNLSGPRISNVQILEFLKGLISEQTGISIDSISMTDNLTSYGIDSIGVVKATQKLSDFLGVPVAAIDVFTASCIQELANFSENLLLKSQPQLVNDKSHVAELEIDSSELIVDVTKSRQLGIRFLQLLALIYMSTILVFPAYLSITTFLGFIQSFSEPVDGIPWLNYLISLTFAPLAWILCMVSTCICISLFGTSFLRPNYTLAPEISIYSVDFIKWWALYKMQEISSKVLAVHLRGTIFLKYWFEMLGARIGSAVLLDTVDITDPSLVSIGDKAVIAEGVLLQSHEVKNGVVSFFPIRIGKGSSIGPYAVLQKGSVVGEGTEVQPLQKVEAGQHVLKMARLNNFNKNVVLPVDTSEAESAAINHFIGIYLIGFLNSLAAAVVYFLYIRFFSKTPSFQDFSFICLSGAFHWIPFTITAYATMFSNVPSSPIIFAISFSCAYLLHGLILSSLTCFLTRLMGFSQKQTHFKIWLQHRITIACHLRFAKLLTGTEAFCMYLRLLGAKIGKHCSIRAINPVSNPKLMSVGVGAHLGDFCRIITGFHSSHGYVSEKVKIQDNSVVGSQSLILPGSTIQKNVILGALSIAPMNSTLQEGGVYIGSQTRVANRNSINALDERIEEMDMEYKKLVSNLAANLAVTTLKAKARYFHRIGLSGKGYLKLYNKIEGFPLHKIFHPGKTYPIIVRHSNSLSADDDARIDARGAALKILSEGPTSECSIYDLTLKTGNAFYARTIADFTNWLVCGLDARKEFVKRVPHVRDAVWNSLRNANSYAELHYYSNFCRLIRFTDGQEMYVRFKLRPSDKSISEDSGKVEPQGILPPETGAIPRDENDTRPLLFLADDFEKRVNSPSGVQYILQVQLQPIPDDEASRDIALDCTKPWDENKFPFIDVGEININQILPAEESERLDFNPYLRSYELDVIHATSSSQSASIDHGRSLIYEISQKLRNKEPLPEALRNFIEQSDVKVDLSKCPMAAPASQKDEFQEVSLTRTRYQTLSAIFIQPLLQTSLPYLVVGLAIFGPLNWVVQQKNAKKLPVHWLLPLCWVFSGIVAALACVVAKYVLVGRKKTGETVAIWSQRVTMDSTWQAIRTVVGDYFMDMTSGSFWFVVWMKLMGAEVDTDREAYVDSAGVLLNPEMVKIGNGGCVGREALFFGHIYEGEGSMVKFGEINIGEDAFVGSRAVVMPGVQVEDEGSLGTLSLAMKREIIRSK 2318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g1323 2318 Gene3D Hexapeptide repeat proteins 2186 2311 - -
Lele30g1323 2318 Gene3D Catalase core domain 1713 2064 - -
Lele30g1323 2318 Gene3D Hexapeptide repeat proteins 1358 1457 - -
Lele30g1323 2318 SUPERFAMILY Acetyl-CoA synthetase-like 506 1078 - -
Lele30g1323 2318 SMART Phosphopantetheine attachment site 1124 1195 IPR020806 GO:0031177
Lele30g1323 2318 Gene3D - 23 446 IPR036188 -
Lele30g1323 2318 SUPERFAMILY Trimeric LpxA-like enzymes 1353 1433 IPR011004 -
Lele30g1323 2318 Pfam AMP-binding enzyme 525 958 IPR000873 -
Lele30g1323 2318 Gene3D - 1114 1194 IPR036736 -
Lele30g1323 2318 SUPERFAMILY Trimeric LpxA-like enzymes 1602 1715 IPR011004 -
Lele30g1323 2318 Gene3D - 482 952 IPR042099 -
Lele30g1323 2318 ProSiteProfiles catalase family profile. 1684 2318 IPR018028 GO:0004096|GO:0006979|GO:0020037
Lele30g1323 2318 ProSitePatterns Phosphopantetheine attachment site. 1150 1165 IPR006162 -
Lele30g1323 2318 PRINTS Adrenodoxin reductase family signature 47 60 - -
Lele30g1323 2318 PRINTS Adrenodoxin reductase family signature 23 45 - -
Lele30g1323 2318 Gene3D - 94 202 - -
Lele30g1323 2318 SUPERFAMILY Heme-dependent catalase-like 1745 2057 IPR020835 GO:0020037
Lele30g1323 2318 MobiDBLite consensus disorder prediction 1913 1933 - -
Lele30g1323 2318 Coils Coil 1718 1738 - -
Lele30g1323 2318 Gene3D - 303 396 - -
Lele30g1323 2318 ProSitePatterns Putative AMP-binding domain signature. 680 691 IPR020845 -
Lele30g1323 2318 Pfam Phosphopantetheine attachment site 1126 1190 IPR009081 -
Lele30g1323 2318 Gene3D - 953 1080 IPR045851 -
Lele30g1323 2318 SUPERFAMILY Trimeric LpxA-like enzymes 2167 2310 IPR011004 -
Lele30g1323 2318 PANTHER DISCO-INTERACTING PROTEIN 2 DIP2 -RELATED 131 2075 - -
Lele30g1323 2318 CDD FAAL 509 1072 IPR040097 GO:0008610
Lele30g1323 2318 Pfam Flavin containing amine oxidoreductase 32 265 IPR002937 GO:0016491
Lele30g1323 2318 ProSiteProfiles Carrier protein (CP) domain profile. 1121 1195 IPR009081 -
Lele30g1323 2318 SUPERFAMILY ACP-like 1122 1195 IPR036736 -
Lele30g1323 2318 SUPERFAMILY FAD/NAD(P)-binding domain 21 271 IPR036188 -
Lele30g1323 2318 Gene3D Hexapeptide repeat proteins 1589 1712 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g1323 Lele-ChrLele30 15560411 15567915 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g1323 675 991 Monolignol Biosynthesis Gene Families AT1G20480 27.044 1.03e-20 97.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele30g1323 30 15560411 15567915 Lele31g1475 31 20108674 20117276 hybridization
Lele30g1323 30 15560411 15567915 Lele32g0072 32 417499 426486 hybridization