Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g1314 ATGGAATCTTCAACTCCTCTCCCGCCGGAGATCCACCTCAACAACCTCAGGGTCCTCAAAGTCCTCGGTAAGGGTGGCATGGGCACTGTCTTCCTCGTCCACGACACCTCAATCGATCCCTCTGCCCACTTCCCCTTCGCCCTCAAGGTCCTCGACAAATCCTCCATCAATTCCCACCACACCACCCTCGACGCCGACCGTCGTGCCCGCTGGGAAATCCAGGTCCTCACTCGTCTCTCCCACCCCTTTCTCCCTTCCATTCTCGGAACCATTGAGTCCGACCATCTTCTCGGTTGGGCTCTTCCTTATTGCCCCGGTGGTGATCTTCACGTCCTCCTTCACCGCCAAGTTGATCGGGTGTTCTCCCCCGCTGTCATTCGCTTCTATTTGGCAGAGATCCTCTGCGCCGTCGACCATCTTCACGGCATTGGCATCGCCTACCGCGATTTGAAGCCCGAGAACGTCCTCATTCAGCAGTCGGGCCACGTCACTCTCACCGACTTCGATCTCTCTCATAAGCTCAAACCCAAATCCATCAGAACGGTCATTTCGTCAACACCAGCTCAAGAGAATTTCCCAGAAATCCGCAGGAAAAATCGCCGGAATTTGACGCGATGGTTCCCCACCTCAACGGAGAACAGGAAGGGGAAGAAGAAGGCGAAGTCCGCCCGAGTCAGCCCGGTGAGTCGACGGAAACCGAGTTTCTCCAGTGGTGAGAAGTCTAACTCGTTTGTGGGCACGGAAGAGTACGTATCCCCGGAGGTAGTGCGCGGCGACGGTCACGAGTTCGCCGTTGATTGGTGGGCCTTGGGAATATTAGCTTACGAGATGTTATACGGTACGACGCCGTTCAAGGGGAGTAACCGGAAGGAAACCTTTCGGAATGTTCTGTTGAAAACCCCGGAATTCATAGGAAAGCGGACGGTACTAACGGATTTGATTGAGCGGTTACTGGAGAAGGATCCCACGAAGCGGTTGGGTTACGCGCGAGGAGCGTGCGAGATCAGGGAGCACGAGTTCTTCAGACGGGTACAGTGGGACCTACTAACGGAGGTAGTAAGGCCGCCGTTCATTCCGCCGAGAGAGGAGGGCGTCGACTTGACTGCGAACGGTACGGACATAAATGATTATTTCCGTAGCCTGAAATCGCCGCCGTCATTCCCCGCATCGCCGTCTTCTGAGTATCAGAGGAATGTCTCGTACGGAGAATTTTGA 1215 0.5523 MESSTPLPPEIHLNNLRVLKVLGKGGMGTVFLVHDTSIDPSAHFPFALKVLDKSSINSHHTTLDADRRARWEIQVLTRLSHPFLPSILGTIESDHLLGWALPYCPGGDLHVLLHRQVDRVFSPAVIRFYLAEILCAVDHLHGIGIAYRDLKPENVLIQQSGHVTLTDFDLSHKLKPKSIRTVISSTPAQENFPEIRRKNRRNLTRWFPTSTENRKGKKKAKSARVSPVSRRKPSFSSGEKSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILAYEMLYGTTPFKGSNRKETFRNVLLKTPEFIGKRTVLTDLIERLLEKDPTKRLGYARGACEIREHEFFRRVQWDLLTEVVRPPFIPPREEGVDLTANGTDINDYFRSLKSPPSFPASPSSEYQRNVSYGEF 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g1314 404 Gene3D Transferase(Phosphotransferase) domain 1 108 187 - -
Lele30g1314 404 ProSiteProfiles Protein kinase domain profile. 16 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele30g1314 404 SUPERFAMILY Protein kinase-like (PK-like) 13 393 IPR011009 -
Lele30g1314 404 MobiDBLite consensus disorder prediction 383 404 - -
Lele30g1314 404 MobiDBLite consensus disorder prediction 203 242 - -
Lele30g1314 404 Pfam Protein kinase domain 236 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele30g1314 404 Pfam Protein kinase domain 18 182 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele30g1314 404 FunFam Serine/threonine-protein kinase OXI1 108 176 - -
Lele30g1314 404 FunFam Serine/threonine-protein kinase OXI1 239 360 - -
Lele30g1314 404 SMART serkin_6 16 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele30g1314 404 PANTHER FLIPPASE KINASE 1-RELATED 11 366 - -
Lele30g1314 404 Gene3D Phosphorylase Kinase; domain 1 16 107 - -
Lele30g1314 404 Gene3D Transferase(Phosphotransferase) domain 1 238 360 - -
Lele30g1314 404 ProSitePatterns Serine/Threonine protein kinases active-site signature. 145 157 IPR008271 GO:0004672|GO:0006468
Lele30g1314 404 ProSitePatterns Protein kinases ATP-binding region signature. 22 49 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g1314 Lele-ChrLele30 15517241 15518455 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g1314 11 404 AGC Kinase Gene Family AT3G20830 57.908 3.19e-157 447
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Lele30g1314 Pkinase 1.1e-29 CL0016