Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g1306 ATGGAATGGAGTGGGGGAAGGAAGAGAAGCAAGGGAACGTCGTTGAAGCAGCAAAAAATGGAGAGAGAAGTGGAAAGCATGAGGGAGTATTATGGCAGTGGCAAGACTAAAGAAGCTTCATGGAGAGCATCACAGCTTGAAGGCTTGCGTGCTTTCCTCACCCACAGACAACATGACATCTTCAACGCTCTCATGCAAGATCTTGCAAAACATCATCTCGAGTCCTTTCGAGACGAGATAGGAACTCTGATCAAGTCCTTAAATTTAGCTTTGAAGCATTTGAAACATTGGATGTCACCCAAAAAGGCTGACTTGCCACGAATAGCACTCCTTACAAGTGCAGAAATCGTTGCAGAGCCTTTGGGTCTGGTGCTCATTATATCATCTTGGAATTTCCCCTTTGGACTGTGCTTGGAGCCACTGATCGGAGCAGTAGCCGCCGGGAACACAGTAGTCCTAAAGCCTTCAGAGCTATCCTCTGCAAGTGCTTCTCTGCTGGCCTCTGCCCTCCCAGATTACTTGGACAACAGAGCCATTAAGGTCGTCCAGGGAGGCCCAGAAGTGGCCGAGCAATTACTCCTCCAAAAATGGGACAAAATCTTCTTCACTGGAAGTCCACGTGTGGGACGAATTGTGATGTCGGCAGCAGCAAAACATCTGACACCAGTGACTTTGGAGTTGGGTGGAAAAAGCCCTGCTGTTGTTGATTCCCTATCCTCTTCTTGGGACAGAGAGGTGGCTGCAAAACGAATTATTGTGGGAAAATTTGGGACCTGTGCTGGTCAAGCATGCATAGCAATCGATTATATTCTTGTTGAAAAGGAATTCGCTTCAACATTGGTGGAACTGATGAAGGTTTGGATCAAAAAGATGTTCGGGGAAAAGCCGTCAGAATCCAACACCATTGCCAGGATAATTAACAAACAACACTTCTTCAGACTGAAGAATCTTCTTTCGGATCCAAGGGTCAAAGAATCCGTAATCTATGGCGGCTCAATGGACGAAGAACACTTATTTATTGAACCAACGATCTTGATGGATCCCCCACTTGAAGCGGCGATCATGTCGGAAGAAATTTTCGGTCCATTGCTTCCAATTATTACGCTGGATAAGATTGAAGATAGCATCAAATTCATAAACTCAAGGCCTAAGCCTCTTTCCCTCTACGTGTTCACCAAAAGCCAAACCCTTCAGGGAAGAATGGAGTCCGAAACATCATCGGGAAGCGTGACGGTCAACGATGCAATTCTTCAATATGCGGCGGATAGCTTGCCATTTGGAGGAGTTGGGGAAAGTGGGTTTGGGAACTACCACGGGAAGTTCTCATTTGATACCTTCAGCCACAAGAAGGGAATCGTGAGGAGAAGCTTCCTCACAGATTTCTGGTTTAGGTATCCTCCATGGACACTTACTAAGTTTCAGGAACTTGAGGCGTCTTACAATTATGACTATCTGGGATTGCTTCTCGTCTTGCTCGGCTTAAAGACATCTCCAAAACGTCTTTGA 1506 0.4608 MEWSGGRKRSKGTSLKQQKMEREVESMREYYGSGKTKEASWRASQLEGLRAFLTHRQHDIFNALMQDLAKHHLESFRDEIGTLIKSLNLALKHLKHWMSPKKADLPRIALLTSAEIVAEPLGLVLIISSWNFPFGLCLEPLIGAVAAGNTVVLKPSELSSASASLLASALPDYLDNRAIKVVQGGPEVAEQLLLQKWDKIFFTGSPRVGRIVMSAAAKHLTPVTLELGGKSPAVVDSLSSSWDREVAAKRIIVGKFGTCAGQACIAIDYILVEKEFASTLVELMKVWIKKMFGEKPSESNTIARIINKQHFFRLKNLLSDPRVKESVIYGGSMDEEHLFIEPTILMDPPLEAAIMSEEIFGPLLPIITLDKIEDSIKFINSRPKPLSLYVFTKSQTLQGRMESETSSGSVTVNDAILQYAADSLPFGGVGESGFGNYHGKFSFDTFSHKKGIVRRSFLTDFWFRYPPWTLTKFQELEASYNYDYLGLLLVLLGLKTSPKRL 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g1306 501 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 28 450 IPR016162 GO:0016491
Lele30g1306 501 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 225 232 IPR029510 GO:0016491
Lele30g1306 501 PANTHER ALDEHYDE DEHYDROGENASE 16 487 IPR012394 GO:0006081
Lele30g1306 501 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 229 432 IPR016163 GO:0016620
Lele30g1306 501 MobiDBLite consensus disorder prediction 1 22 - -
Lele30g1306 501 Pfam Aldehyde dehydrogenase family 15 450 IPR015590 GO:0016491
Lele30g1306 501 FunFam Aldehyde dehydrogenase 229 432 - -
Lele30g1306 501 FunFam Aldehyde dehydrogenase 28 232 - -
Lele30g1306 501 SUPERFAMILY ALDH-like 21 469 IPR016161 GO:0016491
Lele30g1306 501 PIRSF ALDH 8 487 IPR012394 GO:0006081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g1306 Lele-ChrLele30 15463686 15466595 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g1306 17 495 Aldehyde Dehydrogenase Gene Family AT4G36250 52.610 0.0 553
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele30g1306 30 15463686 15466595 Lele31g1459 31 20014906 20018506 hybridization
Lele30g1306 30 15463686 15466595 Lele32g0088 32 515223 518009 hybridization