Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g1304 ATGAGGAAGCCTGAGTCTGGAAAAAACAAAAACTTCAATAACAAGCTTAGGAAGGGGCTGTGGTCACCGGAAGAAGATGACAAGCTCATGAACTACATGCTAACCAATGGACAAGGCTGTTGGAGTGATGTCGCCAGGAATGCTGGCTTGCAAAGATGTGGCAAAAGTTGTCGCCTTCGCTGGATCAATTACTTGAGGCCTGATCTTAAGCGTGGTGCTTTCTCTCCCCAGGAAGAAGAACTTATCATCCATCTTCACTCCCTTCTCGGCAACAGATGGTCCCAAATAGCGGCACGCTTGCCCGGGCGAACCGACAACGAAATCAAGAATTTCTGGAACTCCGCAATAAAGAAAAGGCTCAAGCTCATGTCATCCACCGCCACCAACACCACCTCACAAAATGCAAGCGACTCGTCTTCCTTATTATCTGAGCCTAATCATAATAAAGACCTCAACAACGTCATGGGCGGTTTCATGCCTATGTTCAACAACAACATAATTGAGAGATTGCCTATGCTCGAGCATGGACTAAACGCGCAAGCAGCTTCTGAAGGATTCTTCAACAGTAATAATGGAGGGCGGCCTTGCTTCACACAAAATAACGGGGTCGACCACAACAAGATTATTAATAATGGTTTTTATGTAGAAAATGGAGTGTTTGGGATTGGGAGTGTAAATATTGGAGCAGAAGTAGGGGAGCTGTTTGTGCCTCCTCTAGAGAGTGTTAACAGCACGATAACTGATAACCTACAGAAACTGGAGAATAGAGACACTAACGTTAACGGTTACTTTGATAATATAAACAGCATCGTTAATAACTGCAACACTAGCAGCAACAATAATAATAATAGAGGTGGCGTCGTGGAGAATCTGTTTCAGGAAGAGTTAACTTTGGGAGAGTGGGACTTAGAGGACTTGATGAAAGATGTTTCATCCTTTCCCTTTCTTGATTTTTCAAGCTGA 963 0.4393 MRKPESGKNKNFNNKLRKGLWSPEEDDKLMNYMLTNGQGCWSDVARNAGLQRCGKSCRLRWINYLRPDLKRGAFSPQEEELIIHLHSLLGNRWSQIAARLPGRTDNEIKNFWNSAIKKRLKLMSSTATNTTSQNASDSSSLLSEPNHNKDLNNVMGGFMPMFNNNIIERLPMLEHGLNAQAASEGFFNSNNGGRPCFTQNNGVDHNKIINNGFYVENGVFGIGSVNIGAEVGELFVPPLESVNSTITDNLQKLENRDTNVNGYFDNINSIVNNCNTSSNNNNNRGGVVENLFQEELTLGEWDLEDLMKDVSSFPFLDFSS 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g1304 320 Gene3D - 15 71 - -
Lele30g1304 320 PANTHER MYB DOMAIN PROTEIN 55 13 283 - -
Lele30g1304 320 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 13 65 IPR017930 -
Lele30g1304 320 FunFam MYB transcription factor 15 71 - -
Lele30g1304 320 CDD SANT 21 65 IPR001005 -
Lele30g1304 320 Pfam Myb-like DNA-binding domain 18 65 IPR001005 -
Lele30g1304 320 Pfam Myb-like DNA-binding domain 71 114 IPR001005 -
Lele30g1304 320 MobiDBLite consensus disorder prediction 127 146 - -
Lele30g1304 320 SUPERFAMILY Homeodomain-like 16 112 IPR009057 -
Lele30g1304 320 CDD SANT 73 113 IPR001005 -
Lele30g1304 320 ProSiteProfiles Myb-like domain profile. 13 65 IPR001005 -
Lele30g1304 320 SMART sant 70 118 IPR001005 -
Lele30g1304 320 SMART sant 17 67 IPR001005 -
Lele30g1304 320 Gene3D - 73 142 - -
Lele30g1304 320 FunFam Transcription factor MYB46 72 147 - -
Lele30g1304 320 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 120 IPR017930 -
Lele30g1304 320 ProSiteProfiles Myb-like domain profile. 66 116 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g1304 Lele-ChrLele30 15452005 15453977 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g1304 1 315 MYB Transcription Factor Family AT5G12870 47.516 2.23e-77 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele30g1304 Myb_DNA-binding 5.2e-12 CL0123