Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g1303 ATGTACTTAGCAGGCACACGCCTTAACCACTCGGCCAAAGCGACTTGTTATTTGAGAAATGATTATATTATACATTTGCCAGCGCCACTGCCACCGCCACCGCCGCCTCCTTCCCCACCTTTCCATCCCTCCGATTGCGATCCTCTAACCTCATTCCTTCGAAACCTTCGCGCTTATGCTGTTCGGCCTCAGGTTCCCTGCACTCTTCCAATTTCAAAGTACTCAAACAGAACTCTTTTCCATCTGTTCCACCCGAGACTCTCCAAGTCTGGTTTCAACGTCAAACCCCATTGGAAATACCCTTCCGTTAAAGCCTCCGCTTCGGGCGCTTCTCTCGCTTCGGCTCCAACTCCGGCTCCGCCGCCTCAGCCATGGCGCGGCGCAGCTATCAAGCCGTTATTAGCCTCCATAGCGACTGGGGTTCTTCTCTGGTTCGCTCCCGTGCCTGCTGGAGTCTCAAAAAACGCGTGGCAACTGTTGGCTATATTCTTGGGCACCATCGTTGGCATTATTTCTCAGCCATTGCCCCTGGGAGCTGTGGCTATACTGGGTTTGGGCGTTTCTGTGCTGACCAAAACCCTGACGTTTGCCGCGGCATTTTCAGGTTTTGGCGATCCCATCCCGTGGCTCATTTGCCTGGCCTTTTTCTTTGCCAGAGGATTCATTAAGACTGGTCTTGGCAACAGGATCGCTTACCAATTTGTATCTCTTTTTGGTAGCTCATCCTTAGGGCTAGGATATAGTTTAGTTTTTAGCGAGGCCTTGTTGGCACCGGCGATTCCTTCGGTTTCGGCTAGAGCAGGTGGAATATTTCTCCCGTTGGTGAAGTCCCTATGTGTCGCTTGTGGTAGTAACTCGGGCGATGGAACTGAGCATAAACTTGGGTCTTGGCTAATGCTAACCTGCTTTCAAACTTCGGTGATTTCATCAGCAATGTTTTTGACAGCAATGGCAGCTAATCCCCTGTGCGCCACTCTGACTGCCAATTCTATTAACCAGACAATTGGGTGGTTGGACTGGGCGAAAGCCGCGATTGTCCCCGGTTTGGTGTCATTGGTATTGGTACCATTGATTTTGTATGTGATTTACCCACCAACAGTAAAGGCCAGCCCAGATGCGCCCAAGCTTGCTCGGGAGAAGTTGCAGCAGATGGGACCAATGACAACTGAAGAGAAGACAATGGCTATCACTCTATTTCTTACGGTGGGGCTTTGGATATTTGGAGGGGCTCTGAAAGTAGATGCCGTATCTGCTGCCATTCTTGGATTATCTGTACTTCTTGTTACAGGGGTTGTTACATGGAAAGAATGCTTGGCCGAGGGTGTTGCTTGGGATACCCTCACGTGGTTTGCTGCCCTCATAGCAATGGCTGGGTATCTAAACAAATATGGTCTCATTTCCTGGTTCAGTCAAACTGTAGTCAAGTTTGTCGGCGGATTGGGTCTCTCTTGGCAGCTATCATTTGGCATTCTGGTTCTTTTGTACTTCTACTCACATTACTTCTTTGCAAGTGGAGCAGCACATATCGGTGCCATGTTTACAGCCTTCTTGTCAGTTGCTTCTGCTCTGGGCACTCCACCATTCTTTGGAGCGATGGTGCTGTCTTTCCTATCCAACCTCATGGGTGGCCTAACCCACTACGGGATCGGGTCAGCACCTGTGTTTTTTGGAGCCAATTATGTTCCTCTTGCCAAATGGTGGGGTTATGGTTTCCTTATTAGTATTGTAAACATCATTATCTGGCTTGGAGTTGGAGGGGTTTGGTGGAAGGCCATTGGTGATTCTGATGGAGATTTTGTTTACTTTGGAACGTTGGAGGAACCTGCTGTTCAGTTGATTTTTCATGAATGTCAGGTTGACACTAGCTTAGAATGTGGCTCAAACCCCAACCCGTGTGACCTGAATGGCTCAGGTCCTGTGGAGCTCGCTGCTGTAGGTGTTTCCATAGCACTATTCAATCAAGTATCAAGGATTGCGATATTCCCGCTTGTAAGTGTCACGACTTCTTTTGTGGCCGAGGAAGATACTCTTGGTGGAGTGAGTTCGCAAGTAGAGGAGAATGATAACTTGGAAGAAGGTGCACCTATGGATGCTGAAACCAAAGAGTTTATACCACAAAAGTGTTCCACTTATTCTTTGGAGCAACAATTTATTGCTCCATTGGGCTATGAATTGGCTGGAGATGTTACCAACATAGCACTATATCCTCTTTTCATGTTTGTATTCCGCCTGGGTATCAGTGGTGCAGCCATTGCCCATGTTATATCTCAGTACCTAATCTCAGCCATACTCCTGTGGAGATTGATTGGACAAGTTGATCTTATGCCCCCTTCCAGGAAGCATCTACAATTTGATCGATTTCTTAAAAACGGTTTTCTATTATTAATGAGAGTCATTGCTATAACATTCTGTGTGACACTTTCTGCATCACTAGCGGCACGGCAAGGATCAACATCTATGGCTGCATTTCAAGTTCGCTTGCAGGTTTGGTTGGCAACATCTCTTCTTGCTGATGGTCTGGCAGTTGTTGGGCAGGCAAAGTTGGTTGATGTAATGAACAATTACCCCGTAGATGGGCTTGGTTCTGGGATTGGGGCTTGCGATTTTCCTCGGAATAGGGCTGCATTTGGGAGCTAA 2637 0.4782 MYLAGTRLNHSAKATCYLRNDYIIHLPAPLPPPPPPPSPPFHPSDCDPLTSFLRNLRAYAVRPQVPCTLPISKYSNRTLFHLFHPRLSKSGFNVKPHWKYPSVKASASGASLASAPTPAPPPQPWRGAAIKPLLASIATGVLLWFAPVPAGVSKNAWQLLAIFLGTIVGIISQPLPLGAVAILGLGVSVLTKTLTFAAAFSGFGDPIPWLICLAFFFARGFIKTGLGNRIAYQFVSLFGSSSLGLGYSLVFSEALLAPAIPSVSARAGGIFLPLVKSLCVACGSNSGDGTEHKLGSWLMLTCFQTSVISSAMFLTAMAANPLCATLTANSINQTIGWLDWAKAAIVPGLVSLVLVPLILYVIYPPTVKASPDAPKLAREKLQQMGPMTTEEKTMAITLFLTVGLWIFGGALKVDAVSAAILGLSVLLVTGVVTWKECLAEGVAWDTLTWFAALIAMAGYLNKYGLISWFSQTVVKFVGGLGLSWQLSFGILVLLYFYSHYFFASGAAHIGAMFTAFLSVASALGTPPFFGAMVLSFLSNLMGGLTHYGIGSAPVFFGANYVPLAKWWGYGFLISIVNIIIWLGVGGVWWKAIGDSDGDFVYFGTLEEPAVQLIFHECQVDTSLECGSNPNPCDLNGSGPVELAAVGVSIALFNQVSRIAIFPLVSVTTSFVAEEDTLGGVSSQVEENDNLEEGAPMDAETKEFIPQKCSTYSLEQQFIAPLGYELAGDVTNIALYPLFMFVFRLGISGAAIAHVISQYLISAILLWRLIGQVDLMPPSRKHLQFDRFLKNGFLLLMRVIAITFCVTLSASLAARQGSTSMAAFQVRLQVWLATSLLADGLAVVGQAKLVDVMNNYPVDGLGSGIGACDFPRNRAAFGS 878
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g1303 878 PANTHER DICARBOXYLATE TRANSPORTER 2.1, CHLOROPLASTIC 104 593 IPR030676 -
Lele30g1303 878 TIGRFAM dass: transporter, divalent anion:Na+ symporter (DASS) family 147 589 IPR001898 GO:0016020|GO:0022857|GO:0055085
Lele30g1303 878 Pfam Sodium:sulfate symporter transmembrane region 132 592 IPR001898 GO:0016020|GO:0022857|GO:0055085
Lele30g1303 878 CDD ArsB_NhaD_permease 167 589 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g1303 Lele-ChrLele30 15438486 15450827 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g1303 103 593 Antiporters AT5G12860 85.801 0.0 833
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele30g1303 30 15438486 15450827 Lele31g1455 31 19990258 19998264 hybridization
Lele30g1303 30 15438486 15450827 Lele32g0091 32 535604 538728 hybridization