Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g1291 ATGACCAGTTTGTTGAAGCAAATGGAACATGAAAAGGCTCCAGTCCTAGAAGCAAGTTCCATGCAGGAAATAGAGATGCCAGTTGCCTCCGAAAGAATTGATATTGTTCCTGCGGCAACAGAGTCATCTTGCATTTCTGTTTGCCCTTTTTCCAGACAAGAACATAGTCTTATGGCATCAGAAGAGTCATCAAAGTCGGCAAAGAAACTCTGTGGACTCATAGTTTTCTATGCAATGGTTATGCTTGTGGAAGTTGTTGGTGGTTTGAAAGCCAACAGCCTTGCTGTTATCAGTGATGCTGTGCATTTGCTTTCGGATATTGCTGGATTCTCTATCTCTCTCTTTGCAGTATGGGCATCAAGTTGGGAGGCAACTCCACATCAGTCTTTCGGATACAACCGGCTCGAGGTTCTGGGTGCTCTTATTTCTGTGCAGTTAATTTGGCTAATATCTGGCTTTTTAATATATGAAGCACTCGGCAGACTTCTTTACAGAAAGGCCAGGGTGAATGGCATGCTCATGCTTTCAATTGCAGCATTTGGGTTTGTTCTTAACTTAATTATGTTTTTATGGCTTGGTCATGATCACAGTCATCACCACCATCACCATCATCATCATCATGGCTGTGGGCACTCTAATCTTGATCATGGAAAGGAGGAGCAGCATAATAACATAACAGATGAAGAGGAGCTCAGTCTAGTTTCAAGTAGCCCTAGAAAAAGAAATGTACTGAACATAAATTTGCAGGGGGCCTATCTGCATGTCATGGCTGATCTGATTCAATCTGTCGGGGTGATGATCGCCGGCGCTGTAATATGGGTTAAACCAGATTGGTTAATGGTTGACCTGTTGTGTACTATAATATTCTGCGTTATATCTCTGGGAACTACAGTGTCAATGCTCAGTAATATTTACGGCATTCTGATGGAGAGGACGCCAAGTGATATCGATAACATGCAGCTGGAAAATGACCTCAAGGGGATCAAGGGAGTACAAGATATCCACGACTTGCACATTTGGACCATAACTGTGGGGGAAAATGTTCTGTCTTGTCATGTTGTAGCCGAGCCTGGGATCAGTTCCCCGGATTTGCTCAACAGGATTAGGCATTACTGTGAAACAGCACACAAAATTCATCATGTAACTATACAAATTGAATAA 1161 0.4272 MTSLLKQMEHEKAPVLEASSMQEIEMPVASERIDIVPAATESSCISVCPFSRQEHSLMASEESSKSAKKLCGLIVFYAMVMLVEVVGGLKANSLAVISDAVHLLSDIAGFSISLFAVWASSWEATPHQSFGYNRLEVLGALISVQLIWLISGFLIYEALGRLLYRKARVNGMLMLSIAAFGFVLNLIMFLWLGHDHSHHHHHHHHHHGCGHSNLDHGKEEQHNNITDEEELSLVSSSPRKRNVLNINLQGAYLHVMADLIQSVGVMIAGAVIWVKPDWLMVDLLCTIIFCVISLGTTVSMLSNIYGILMERTPSDIDNMQLENDLKGIKGVQDIHDLHIWTITVGENVLSCHVVAEPGISSPDLLNRIRHYCETAHKIHHVTIQIE 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g1291 386 Pfam Cation efflux family 74 309 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Lele30g1291 386 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 43 386 - -
Lele30g1291 386 SUPERFAMILY Cation efflux protein transmembrane domain-like 67 310 IPR027469 -
Lele30g1291 386 TIGRFAM CDF: cation diffusion facilitator family transporter 68 386 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Lele30g1291 386 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 315 386 IPR036837 -
Lele30g1291 386 Gene3D Cation efflux protein transmembrane domain 66 308 IPR027469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g1291 Lele-ChrLele30 15372339 15373499 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g1291 8 386 Inorganic Solute Cotransporters AT2G29410 49.215 1.72e-119 349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele30g1291 30 15372339 15373499 Lele31g1446 31 19932894 19934057 hybridization
Lele30g1291 30 15372339 15373499 Lele32g0104 32 600186 601115 hybridization