Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g1288 ATGTACCTGCAACTGCGAGTGACGGCTGGTAGCAAACAAGAAGAACAGAAGGTTGCTGGAGACCCGTTGGCTCAATTCCAAAAAGGTGCTGTTCTCATGGTTTGTAGAACTTGTGGGAAAAAGGGAGACCATTGGACTTCAAGGTGTCCATACAAGGATCTTGCCCAGCCAATGGAAGGATTCATTGATAAGCCTGCTGCATCAGAAGCTGCCACCACCGCATCTGGTCCAACCAAGGGACCATATGTTCCTCCTGGTCTGAGAGCAGGTGCAGAGAGAACTGGTGGATCAGATATGCGGCGACGGAATGATGAAAATTCTGTACGGGTCACTAATCTATCTGAGGATACAAGAGAGCCTGACTTGCTTGAACTATTCCGTCCTTTTGGTGCTGTAAGCAGAGTCTATGTTGCTGTTGATCAAAAGACTGGCATTAGCAGAGGATTTGGCTTTGTTAACTTTGTGAACAGGGAAGACGCCCAGAGAGCAATTAACAAACTGAATGGATATGGTTATGACAATCTCATCCTTAGAGTTGAATGGGCCACTCCAAGACCGAACTAA 564 0.4681 MYLQLRVTAGSKQEEQKVAGDPLAQFQKGAVLMVCRTCGKKGDHWTSRCPYKDLAQPMEGFIDKPAASEAATTASGPTKGPYVPPGLRAGAERTGGSDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNREDAQRAINKLNGYGYDNLILRVEWATPRPN 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g1288 187 SMART rrm1_1 107 180 IPR000504 GO:0003723
Lele30g1288 187 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 106 184 IPR000504 GO:0003723
Lele30g1288 187 SUPERFAMILY RNA-binding domain, RBD 103 186 IPR035979 GO:0003676
Lele30g1288 187 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 108 174 IPR000504 GO:0003723
Lele30g1288 187 MobiDBLite consensus disorder prediction 66 106 - -
Lele30g1288 187 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G 30 183 - -
Lele30g1288 187 Pfam Eukaryotic translation initiation factor 3 subunit G 11 54 IPR024675 -
Lele30g1288 187 CDD RRM_eIF3G_like 107 182 IPR034240 -
Lele30g1288 187 Gene3D - 64 187 IPR012677 -
Lele30g1288 187 FunFam Eukaryotic translation initiation factor 3 subunit G 70 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g1288 Lele-ChrLele30 15365868 15366664 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g1288 11 186 Eukaryotic Initiation Factors Gene Family AT3G11400 75.556 1.03e-97 284