Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g1274 ATGTTCCGCTTCGTCCTCGCCAATCCAGAGAAAGTGATCCATTTTGTTTTTTATCTTTCTTTGCTACAAAGATGGCTCTTTTCTAAGAATCACCATCTCCGCCTCCAAGATTATCTGCCGGCTACTCCTCACTCTCCCACCTCATCTTGTAGTCTGGATTGTTTAAAAGTCAAACTAATTGGTTCGGTTCTCCTTCGACTGGCATCTATGGATACTCTCCTGGAAAACTTTCCTGGTGGCCTAAATGGATTTAGATTTGAAAATGGTCATATTTCTGAATTTCCAAACCAGAACCCCATAAACGGGTTTACACATGATGATAAATCCGACGTTTCGTCCTTCTTTCCACCCACTTCAGGAATTCATAGCGAGTCGGGTCATTCTTCTAGCACGAGGACGAACGAAGAATCGGCAGACTGTAACAAATATTCCAATCCGGCTCTCAGATTCATAAGTGAAATCCTCTTGGATGAAGAAGATGACCTGGAGCGCAAGCCTTGCATGTTGCAAGATTGCTTAAAACTCCGGGCTGCTGAAAAATCTTTCTACGATGCCCTCGGTCGTAGTTACCCCTCTTCTCCTCGTCAAATCTCTGATTGCTTCCATGGTGAGAACCCCGATAGCCCAGATGATCAAAACTCGTTTCCTACCCATAATTTCGAGAGCAGCAGCAGCTATACCACTGATAATACATCTGACTCCGAATGGGTGAACAGTGTTGTTAATTCCCCAGAAAACATCCTTGATATCTCAGATCTGCCTCCCGATCTACATGGAGGGACCCTTGATCGGAGCAATCTGCAGCTAAATCTAGGGGATTCGGTGCGCAATTCAGGATCCAGAGGAACTGGGGAAAAGAGAACCCATCGAATGGGTGATTCTACGAACGAAGAAGAGGGCAGAGGAAGCAAACTTTCTGCTGTCAGTTCAAATGATTCAGAGGCAACGGAAATGTTTGATGAAGTACTTCTCTGTAAACCCAAAACTAGTCCATCCTCGTCATGTGGCTCTGGGCCATCTCAAAATGGCACATTCCATCTGAATATTGACTCTGGGGGATCAAACGGGAAGGCAGCGCGTTCAAAGAAAGGGTCTAACAAAGGGACAGCAGTAGATTTGTGGACTCTACTAACCCAATGTGCCCAAGCTGTTGCAAGCTTTGACCAAAGGAATGCCAATGAGCTTCTCAAGCAGATTAGGCTGCATAGTTCACTTTTTGGCGATGGGCTCGAACGTTTAGCTCATTACTTTGCCAATGGCCTTGAGACGCGTTTGGCTGCTGGGACACCATCATATAACCTCCTTAAGGACAATGGAGCAACTGCTGCTGAGATGTTAAAAGCTTACAAACTGTACATCACAGCGTCTCCTTTCCTCAGGATCTCAAATTTCTTGGCTAACAGAACAATTCTGAAGCTGGTAGAAGGTGAAAATAGCCTTCACATTATTGATTTTGGCATTTGCTATGGTTTTCAATGGCCCTGCCTTATCCAGCGTCTTTCAGAAAGACAAGGTGGTCCTCCCAAGCTTCGTATCACAGGAATTGAGTTTCCTCAATCAGGTTTTCGGCCTGCAGAGAGGATTGAGGAGACAGGACGAAGGTTAGCAAACTACTGCAGGAGGTTCAACGTCCCTTTCGAGTACAATTGCTTGGCACAGAATTGGGAAACCATCCGACTGGAGGATCTCAAGATGGACAGAACTGAAATAACTGTGGTTAACTGTTTGTACAGATTGAAGAACCTGCCTGATGAAACTGTGTCTGTGAACAGTCCAAGGGATGCTGTTTTGAAGCTGATAAGGAAGATCGACCCGAGTATGTTCATACATGGCGTTGTCAACGGCACCTACAATGCCCCATTTTTCGTCACTCGGTTCAGGGAGGCACTGTTCCACTACTCATCTTTGTTTGACATGTTTGAGGCCAATGTGCCCCGGGAAGATACAGAGAGGTTGTGGTTTGAGAAGGGGATCTTTGGAAGGGACGCTATGAATGTTATAGCGTGCGAGGGGGCAGAAAGGGTGGAGAGGCCAGAGACTTACAAGCAGTGGCAGATTAGGAATCGTAGAGCCGGGTTCAAGCAACTCCGCTTTGACGCACAAATCTTTAATAAAGCTCAAGAAATGGTGAAGACCGAATATCACAAGGATTTTGCGGTGGATAAGGATAGCAGGTGGGTTTTGCAGGGATGGAAAGGGCGTATCCTTCATGCTCTTTCTATCTGGAAGCCTGCTTAA 2238 0.4593 MFRFVLANPEKVIHFVFYLSLLQRWLFSKNHHLRLQDYLPATPHSPTSSCSLDCLKVKLIGSVLLRLASMDTLLENFPGGLNGFRFENGHISEFPNQNPINGFTHDDKSDVSSFFPPTSGIHSESGHSSSTRTNEESADCNKYSNPALRFISEILLDEEDDLERKPCMLQDCLKLRAAEKSFYDALGRSYPSSPRQISDCFHGENPDSPDDQNSFPTHNFESSSSYTTDNTSDSEWVNSVVNSPENILDISDLPPDLHGGTLDRSNLQLNLGDSVRNSGSRGTGEKRTHRMGDSTNEEEGRGSKLSAVSSNDSEATEMFDEVLLCKPKTSPSSSCGSGPSQNGTFHLNIDSGGSNGKAARSKKGSNKGTAVDLWTLLTQCAQAVASFDQRNANELLKQIRLHSSLFGDGLERLAHYFANGLETRLAAGTPSYNLLKDNGATAAEMLKAYKLYITASPFLRISNFLANRTILKLVEGENSLHIIDFGICYGFQWPCLIQRLSERQGGPPKLRITGIEFPQSGFRPAERIEETGRRLANYCRRFNVPFEYNCLAQNWETIRLEDLKMDRTEITVVNCLYRLKNLPDETVSVNSPRDAVLKLIRKIDPSMFIHGVVNGTYNAPFFVTRFREALFHYSSLFDMFEANVPREDTERLWFEKGIFGRDAMNVIACEGAERVERPETYKQWQIRNRRAGFKQLRFDAQIFNKAQEMVKTEYHKDFAVDKDSRWVLQGWKGRILHALSIWKPA 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g1274 745 MobiDBLite consensus disorder prediction 259 312 - -
Lele30g1274 745 MobiDBLite consensus disorder prediction 329 362 - -
Lele30g1274 745 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 296 736 IPR005202 -
Lele30g1274 745 MobiDBLite consensus disorder prediction 280 300 - -
Lele30g1274 745 ProSiteProfiles GRAS family profile. 364 743 IPR005202 -
Lele30g1274 745 Pfam GRAS domain family 375 743 IPR005202 -
Lele30g1274 745 MobiDBLite consensus disorder prediction 207 236 - -
Lele30g1274 745 MobiDBLite consensus disorder prediction 194 236 - -
Lele30g1274 745 MobiDBLite consensus disorder prediction 329 365 - -
Lele30g1274 745 MobiDBLite consensus disorder prediction 114 140 - -
Lele30g1274 745 MobiDBLite consensus disorder prediction 263 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g1274 Lele-ChrLele30 15280623 15285285 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g1274 70 744 GRAS Transcription Factor Family AT2G29060 44.718 0.0 543
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lele30g1274 GRAS 3.7e-115 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele30g1274 30 15280623 15285285 Lele31g1424 31 19836405 19839715 hybridization