Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g1258 ATGTTTTCGGATTTGAGTCTCGCGTTTTCAACCAAAATGAAAAGCTGTCCAAGTAACGCATTGTCGTATTGGAAGGAGCATGGAGAAAAAGTAAAATCCAAGTTGGAGGGCTCATCGAGATATACTACAGATCAGCATGCATGGGATATTCTGTCGTATATCTGGTCTCTCTCTCTCTCTGTGGGACTTTGGTTGAAATTGAAAGCAGAGAGAGAGAGAGAGCATGCGTGGTGGTTTCACCAATCTGCGTCGAATTCTGTGAGGAGAAAAGCAGCAGAAGAGGGCGAAGGGATTGGTGCATCCTTTTTCACTGCTTGGCTTCACGAGGGTAAAGCCATGGATCAGGGTGGTGAGAATAATAATGGATCGAGTGGGAGCAATGGAGGAGGGGGTTCGAGATGGAACCCTACGAAAGAGCAAATAACTATGTTGGAGAATCTGTATAAGCAAGGGATAAGGACGCCCAGTGCTGAGCAGATTCAGCAAATAACTGCGAGGCTCAGGGCCTTTGGTCATATCGAAGGCAAGAATGTCTTCTATTGGTTTCAGAATCACAAGGCCAGGCAGCGACAGAAGCAGAAGCAAGAAACCTTTGCTTACTTCAATCGCTTTCTTCATCATCCCTCCCCTCATCACCACCACCCGCCTCTCTTCTCTTCCCCACTTTACCCTAATAATGCATATTATCTGCCACACAGTGAAATGGGGTTCGTTGCTCATCAACATCCGAAAGTACTTCTGGCAGGAGCAGGAATTAGGAGGACGATGCCCAGAAACTGTGAGGTATACCAACAAATGCAGGACAATGCAATAATGTCGGATGATGGGTACTTGAGGAAAAAAGAAACGCTCGCGCTTTTCCCTGTGCAACCAACTGGCTTTCTCGAAGACAAAACTTCTTTTTCTGTTGATGCTACTAATCCAGCTTCTGTTTCTCAGGCTCATCATCACAATGATGAAGAAGATGGCCCACCAGGAAACCGGCATTTCTTTGATTTTCTTTCTTCTTCAGGCCAAGAGTTTCTGCATAGAAAGTAA 1038 0.4566 MFSDLSLAFSTKMKSCPSNALSYWKEHGEKVKSKLEGSSRYTTDQHAWDILSYIWSLSLSVGLWLKLKAEREREHAWWFHQSASNSVRRKAAEEGEGIGASFFTAWLHEGKAMDQGGENNNGSSGSNGGGGSRWNPTKEQITMLENLYKQGIRTPSAEQIQQITARLRAFGHIEGKNVFYWFQNHKARQRQKQKQETFAYFNRFLHHPSPHHHHPPLFSSPLYPNNAYYLPHSEMGFVAHQHPKVLLAGAGIRRTMPRNCEVYQQMQDNAIMSDDGYLRKKETLALFPVQPTGFLEDKTSFSVDATNPASVSQAHHHNDEEDGPPGNRHFFDFLSSSGQEFLHRK 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g1258 345 Gene3D - 131 200 - -
Lele30g1258 345 Pfam Homeodomain 132 191 IPR001356 GO:0003677
Lele30g1258 345 SUPERFAMILY Homeodomain-like 126 199 IPR009057 -
Lele30g1258 345 FunFam WUSCHEL-related homeobox 4 131 198 - -
Lele30g1258 345 SMART HOX_1 129 196 IPR001356 GO:0003677
Lele30g1258 345 CDD homeodomain 133 193 IPR001356 GO:0003677
Lele30g1258 345 MobiDBLite consensus disorder prediction 308 330 - -
Lele30g1258 345 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 115 313 IPR044555 GO:0003700|GO:0099402
Lele30g1258 345 MobiDBLite consensus disorder prediction 113 136 - -
Lele30g1258 345 ProSiteProfiles 'Homeobox' domain profile. 127 192 IPR001356 GO:0003677
Lele30g1258 345 MobiDBLite consensus disorder prediction 116 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g1258 Lele-ChrLele30 15181009 15186150 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g1258 118 335 Wox Gene Family AT5G59340 41.176 7.22e-46 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Lele30g1258 Homeodomain 8.4e-19 CL0123