Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g1256 ATGGCGAAGATATTAATTTCCTGTCCTGCCTTCATCGGCACTCCTCTTCCTTCTATCTCTCGCCGTGGTCTACACCCCTTCCCTCTCCCTCATCGTAGGCTGCTCAGCACCAGAGTTAAATTCAGCTTCCACGAAATTCCCCCTATTCACTCCCTCAATGATTCCTTTGACTTCAGTCAAATCGTTACTAGAGCTGAAGCGCTTCTTTATACGCTTGCTGATGCCGCGGTTTCCGCCGATTCAGGTGCTGGTGCTGCGGCATCGACCACCACAGATGTTGCCGCACAGAAGAACGGAGGGTGGTTCGGTTTTATTTCTGAAGCCATGGAATTTGTTCTCAAGGTATTAAAAGATGGCCTGAGTGCCGTGCATGTGCCTTACGCATATGGATTTGCTATAATATTGCTCACTGTTATTGTTAAAGTTGCTACACTTCCCTTGACGAAGCAACAGGTTGAATCAACACTTGCTATGCAAAATCTTCAACCAAAAATTAAGGCCATCCAAGAAAGATACGCTGGCAATCAGGAAAGAATACAACTCGAGACATCAAGGCTATACAGGCAAGCTGGTGTCAATCCATTGGCTGGTTGTTTACCGACTTTGGCTACCATTCCTGTCTGGATAGGTCTCTACCAAGCTTTATCAAATGTGGCGAATGAAGGACTTTTGACAGAAGGATTTTTTTGGATCCCCTCTTTGGGTGGTCCTACTACCATTGCCGCTAGACAAAGTGGATCTGGAATTTCTTGGCTTTTTCCATTTGTGGATGGTCATCCACCGTTGGGCTGGCAAGACACGGCAGCATATCTTGTTTTACCTGTCCTTCTTGTTGTTTCTCAATATGTTTCTATGGAAATAATGAAACCCCCCCAGACTGATGATCCGGCTCAAAAAAATACACTTCTTATTTTCAAGTTTCTTCCACTCATGATTGGTTACTTCTCGTTGTCCGTCCCTTCAGGGCTATCAATTTACTGGTTTACAAACAATGTTTTAAGCACAGCACAACAAGTATGGTTGCGCAAATTAGGAGGTGCAAAGCCTGTTGTGAATGAAAATGCAAGTGGAATTATTACTGCAGGACGTGCTAAACGATCAGTTTCTCAGCCAGAAAGAACCGGTGAGAGGTTTAAGCAGTTAAAGGAAAAGGAGAAAAAGAAGTTAAACAAGGCACTGCCTCAAGAAGAGGCTCAACCTCTGGCTTCTGTTTCTGATTCAGATGGTGATTCAGATGAAGAGAGTGATGACAAGGGTGACGAAGTTGCAGAAGAAGCATATGCTTCGACAGTAAACAAGGAGGTTCCAAATTTGAGGGAAAGAAGAAGCAAGCGCTCAAAGCGGAAGCGGGCTGTATAA 1359 0.4459 MAKILISCPAFIGTPLPSISRRGLHPFPLPHRRLLSTRVKFSFHEIPPIHSLNDSFDFSQIVTRAEALLYTLADAAVSADSGAGAAASTTTDVAAQKNGGWFGFISEAMEFVLKVLKDGLSAVHVPYAYGFAIILLTVIVKVATLPLTKQQVESTLAMQNLQPKIKAIQERYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLGGPTTIAARQSGSGISWLFPFVDGHPPLGWQDTAAYLVLPVLLVVSQYVSMEIMKPPQTDDPAQKNTLLIFKFLPLMIGYFSLSVPSGLSIYWFTNNVLSTAQQVWLRKLGGAKPVVNENASGIITAGRAKRSVSQPERTGERFKQLKEKEKKKLNKALPQEEAQPLASVSDSDGDSDEESDDKGDEVAEEAYASTVNKEVPNLRERRSKRSKRKRAV 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g1256 452 MobiDBLite consensus disorder prediction 361 452 - -
Lele30g1256 452 PANTHER OXA1 72 388 IPR001708 GO:0016020|GO:0032977
Lele30g1256 452 TIGRFAM yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 129 342 IPR028055 -
Lele30g1256 452 Pfam 60Kd inner membrane protein 129 343 IPR001708 GO:0016020|GO:0032977
Lele30g1256 452 Coils Coil 379 399 - -
Lele30g1256 452 MobiDBLite consensus disorder prediction 369 393 - -
Lele30g1256 452 MobiDBLite consensus disorder prediction 407 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g1256 Lele-ChrLele30 15169254 15173571 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g1256 36 396 Chloroplast and Mitochondria Gene Families AT2G28800 73.829 0.0 535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele30g1256 30 15169254 15173571 Lele31g1402 31 19726452 19730394 hybridization
Lele30g1256 30 15169254 15173571 Lele32g0141 32 808898 813164 hybridization