Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g1241 ATGGTTCAGCAAGAAATGCGTAAAGGTCCATGGACGGAACAGGAGGACATAAAACTGGTGTCTTTTGTGGGCTTGTTTGGAGACCGAAGATGGGATTTTATTGCAAAGGTTTCAGGTTTGCATAGAACAGGTAAAAGTTGCCGGTTACGTTGGGTTAATTACCTTCATCCTGGTCTCAAACGGAGCAAGATGACACCCCAAGAAGAGCGTCTCGTCCTCGAGCTTCACTCCAAATGGGGAAATAGATGGTCAAAAATTGCTCTCAAATTACCAGGACGCACGGATAATGAGATTAAGAATTACTGGAGGACTCACATGAGGAAGATGGCTCAAGAGAAAAAGCGAGCGGCGGCGGCTTCATTATCGCCTTCATCATCATCAACGTCCTCCAAGAACAGTTCTGGAGAAGAAGAAAGCTTTTATGATAAAGGAGGTCCTGATAACATGATGATATCTTCTTCCAGAGAGATACAGATCACTACAGGGGAAGAAGGGTACTCTATGGACGATATATGGAAAGATATCGAAGCAGAAGACAATAACAGTGAAGAGGGCCGCAACTTGTCTTGTCCTTCATGGGAGAACTCTAGTTCAGAATCGCTATGGGTTATGGACGAAGAGGAAAGTCAGATTTTTAACCCATTTTTTCCCCCAGGGACACCATTTCTTTAA 672 0.4405 MVQQEMRKGPWTEQEDIKLVSFVGLFGDRRWDFIAKVSGLHRTGKSCRLRWVNYLHPGLKRSKMTPQEERLVLELHSKWGNRWSKIALKLPGRTDNEIKNYWRTHMRKMAQEKKRAAAASLSPSSSSTSSKNSSGEEESFYDKGGPDNMMISSSREIQITTGEEGYSMDDIWKDIEAEDNNSEEGRNLSCPSWENSSSESLWVMDEEESQIFNPFFPPGTPFL 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g1241 223 MobiDBLite consensus disorder prediction 118 135 - -
Lele30g1241 223 MobiDBLite consensus disorder prediction 112 150 - -
Lele30g1241 223 FunFam Myb transcription factor 8 60 - -
Lele30g1241 223 Pfam Myb-like DNA-binding domain 61 105 IPR001005 -
Lele30g1241 223 Pfam Myb-like DNA-binding domain 8 55 IPR001005 -
Lele30g1241 223 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 3 55 IPR017930 -
Lele30g1241 223 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 56 110 IPR017930 -
Lele30g1241 223 ProSiteProfiles Myb-like domain profile. 56 106 IPR001005 -
Lele30g1241 223 CDD SANT 10 55 IPR001005 -
Lele30g1241 223 CDD SANT 63 106 IPR001005 -
Lele30g1241 223 FunFam MYB transcription factor 63 132 - -
Lele30g1241 223 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 3 124 IPR044676 GO:0003700|GO:0006355|GO:0043565
Lele30g1241 223 ProSiteProfiles Myb-like domain profile. 3 55 IPR001005 -
Lele30g1241 223 Gene3D - 8 60 - -
Lele30g1241 223 SUPERFAMILY Homeodomain-like 5 102 IPR009057 -
Lele30g1241 223 Gene3D - 63 138 - -
Lele30g1241 223 SMART sant 60 108 IPR001005 -
Lele30g1241 223 SMART sant 7 57 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g1241 Lele-ChrLele30 15085492 15086432 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g1241 1 211 MYB Transcription Factor Family AT5G59780 61.674 2.08e-83 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele30g1241 Myb_DNA-binding 4.6e-14 CL0123