LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele30g1224	ATGATGAATCGTAGAAAAATTGTCTTCTTTATCTGTGGCTTTTCAATTCTGCCGTTGCTATGCTTTTCTGCCAGCTTCGTTCCACAAGACAATTATCTTATAGACTGTGGAGCTGCTTCAAATACTTCATTTGATCGCCGCAATTTCGCGGCGGATGCGTTCTACAAGGATCTCCTTTCTACCAAACGTGATGTTCTCGCCACTACCTCTTCAAAATCAATCGCTTCCTCCGCCGATTCGCCTCTCTATCAAACAGCAAGAATCTTCAGTGAACAGTCAAAGTACACATTCTCGATCAGCCAAAAGGGGAGACATTGGATCCGTCTTTATTTATATCCATTTGAGTACCAGAACTTCGATATGAGTACTGCAAATTTTGCTGTCACCACCCAAAACAATATCCTTCTCACTAACTTCTCTCTGCAGAAAAATCCTGTCGTGAAGGAATACTCCGTGAATGTGACTTCCGACACCCTTGTGATCACCTTTACTCCTTCGAGCAATTCCTTTGCGTTCGTAAATGCCATTGAAGTTGTTTCAGTACCCGATGAACTCATTGCCGATGACGCTTCCACCATAAATCCACTAGAAAGTTTCTCTGGGTTGGTGACACTGGCATTGGAGACCGTTTGGAGGATTAACATGGGTGGCCCAACTGTCTCCTCTGCAAATGATACCCTTCACCGGACCTGGGTACCAGACCAAAATTTTCTTGTCAATCCCGGCCTTGCTACCAATTTTACAAATATGGCTGCTGTTAACTATGTAGGCGGGGGTGCAACAGAGAATATTGCTCCACGTACAGTCTATGGTACTGCCACAGAAATGAACTCAAGCAATGATCCTCGTAGTAATTTCAATGTGACCTGGCAGTTTGACGTAGATCCAGGATTTCAGTATCTTGTTCGACTTCACTTTTGTGACATAGTTAGCAAAAGTCTCAACGAACTTTACTTCAATGTCTATGTCAACTCCTACATGGCGGAAAAAAATATGGATCTCAGCACTTCGAGTAACAATGTTTTGGGTGCTCCATTTTACAAGGATTTTGTTACAGCCCCAACTGATGGCAAGAAAATTCGTGTAAGTGTCGGCCTGCCTTCTTTAGACAGTGATTACCCGAATGCCATTTTAAATGGGCTGGAGATCATGAAAATGAGTAATTCTAAGGGCAGTCTGAGCGTAGGAACAGCTACAATTGGTACTGGTTCAACAAACTCAAAGAAGAAAGTAGCCATTATAGTGGGTGTGGTAGTTGGGACATTGTGTGCAGTGGTCTTGGCTGGATTTTTCTTTGTATTGTGCAGAAGAAAACGTTTGACACGACAAGGCCTTTCCAAGACATGGGTTCCCTTATCCATTAATGATGGAACTTCTCATACCATGGGAAGCAAATATTCTAATGGCACAACACTAAGTGCTGCTTCCAACTTAGGGTATCGCATCCCATTTGCGGCAATTCAAGAGGCTACAAACAATTTTGATGAGGGCTGGGTTATTGGGATAGGTGGTTTTGGGAAAGTGTACAAGGGAGAACTAAATGATGGCACTAAGGTGGCAGTTAAGAGAGGGAATCCTCGGTCCCAGCAAGGGCTTGCAGAGTTCCATACTGAAATTGCAATGCTATCTCAGTTCCGTCATCGCCATTTGGTGTCATTGATAGGTTATTGTGACGACAAAAATGAAATGATCTTGATATATGAATATATGGAAAATGGAACTCTCAAGAGCCATCTCTATGGTTCAGGTCTCCCAAGCTTAAGTTGGAAAGAAAGACTGGAGATCTGTATTGGATCAGCTAGAGGATTACATTACCTTCACACTGGCTATGCCAAAGCAGTTATACATCGAGATGTGAAGTCTGCAAATATCCTGCTTGACGAGAACCTTATGGCCAAAGTTGCTGATTTTGGGCTATCAAAGACAGGTCCTGAAATTGATCAGACACATGTGAGCACAGCAGTAAAAGGAAGTTTTGGATACCTTGATCCTGAGTATTTCCGTAGGCAACAATTAACAGAAAAATCAGATGTTTATTCATTTGGGGTGGTTTTGTTTGAGGTTCTTTGTGCAAGACCTGTAATAGACCCATCCCTTCCTAGAGAAATGGTGAACTTGGCAGAATGGGCAATGAAATGGCAGAAAAAAGGGCAATTGGAGCAAATCATAGATCCTACGCTGGCAGGGAAGATCAGACCGGATTCTCTTAGGAAGTTTGGAGAAACTGCTGAAAAATGCTTGGCTGACTTTGGTGTGGATCGGCCTTCTATGGGGGATGTCTTGTGGAATTTGGAGTATGCCCTTCAACTTCAAGAGGCAGTTGTTCAAGGTGATCCTGAGGAAAACAGTACCAACATGATTGGTGAACTCTCTCCACAGATAAACAATTTCAACCACGATTCAAGTGTTTCTGCTGCTCAGTTTGAAGCTTCAGCCACAGATGACCTGTCTGGTGTTTCAATGAGTAGGGTTTTCTCACAGCTGGTGAAGTCTGAGGGGAGTAGCTATCTGCAAAAGAGTGATGCAACCATAGATTTGTAA	2541	0.4305	MMNRRKIVFFICGFSILPLLCFSASFVPQDNYLIDCGAASNTSFDRRNFAADAFYKDLLSTKRDVLATTSSKSIASSADSPLYQTARIFSEQSKYTFSISQKGRHWIRLYLYPFEYQNFDMSTANFAVTTQNNILLTNFSLQKNPVVKEYSVNVTSDTLVITFTPSSNSFAFVNAIEVVSVPDELIADDASTINPLESFSGLVTLALETVWRINMGGPTVSSANDTLHRTWVPDQNFLVNPGLATNFTNMAAVNYVGGGATENIAPRTVYGTATEMNSSNDPRSNFNVTWQFDVDPGFQYLVRLHFCDIVSKSLNELYFNVYVNSYMAEKNMDLSTSSNNVLGAPFYKDFVTAPTDGKKIRVSVGLPSLDSDYPNAILNGLEIMKMSNSKGSLSVGTATIGTGSTNSKKKVAIIVGVVVGTLCAVVLAGFFFVLCRRKRLTRQGLSKTWVPLSINDGTSHTMGSKYSNGTTLSAASNLGYRIPFAAIQEATNNFDEGWVIGIGGFGKVYKGELNDGTKVAVKRGNPRSQQGLAEFHTEIAMLSQFRHRHLVSLIGYCDDKNEMILIYEYMENGTLKSHLYGSGLPSLSWKERLEICIGSARGLHYLHTGYAKAVIHRDVKSANILLDENLMAKVADFGLSKTGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPVIDPSLPREMVNLAEWAMKWQKKGQLEQIIDPTLAGKIRPDSLRKFGETAEKCLADFGVDRPSMGDVLWNLEYALQLQEAVVQGDPEENSTNMIGELSPQINNFNHDSSVSAAQFEASATDDLSGVSMSRVFSQLVKSEGSSYLQKSDATIDL	846

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele30g1224	846	FunFam	Receptor-like protein kinase FERONIA	570	785	-	-
	Lele30g1224	846	Gene3D	-	30	181	-	-
	Lele30g1224	846	Gene3D	-	205	388	-	-
	Lele30g1224	846	FunFam	Putative receptor-like protein kinase	31	182	-	-
	Lele30g1224	846	CDD	STKc_IRAK	500	765	-	-
	Lele30g1224	846	Gene3D	Phosphorylase Kinase; domain 1	456	569	-	-
	Lele30g1224	846	SUPERFAMILY	Protein kinase-like (PK-like)	472	765	IPR011009	-
	Lele30g1224	846	FunFam	Receptor-like protein kinase FERONIA	206	388	-	-
	Lele30g1224	846	PANTHER	OS07G0166700 PROTEIN	481	771	IPR045272	GO:0004714\|GO:0006468
	Lele30g1224	846	Pfam	Protein tyrosine and serine/threonine kinase	499	692	IPR001245	GO:0004672\|GO:0006468
	Lele30g1224	846	Pfam	Malectin-like domain	34	386	IPR024788	-
	Lele30g1224	846	ProSitePatterns	Protein kinases ATP-binding region signature.	500	522	IPR017441	GO:0005524
	Lele30g1224	846	ProSiteProfiles	Protein kinase domain profile.	494	767	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele30g1224	846	Gene3D	Transferase(Phosphotransferase) domain 1	570	787	-	-
	Lele30g1224	846	FunFam	receptor-like protein kinase FERONIA	458	569	-	-
	Lele30g1224	846	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	614	626	IPR008271	GO:0004672\|GO:0006468
	Lele30g1224	846	SMART	serkin_6	494	767	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele30g1224	Lele-ChrLele30	14977587	14980236	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele30g1224	2	833	Receptor kinase-like Gene Family	AT3G46290	66.508	0.0	1129

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_CrRLK1L-1	Lele30g1224		Malectin_like	1.3e-42	CL0202

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lele30g1224	30	14977587	14980236	Lele09g1211	09	21036190	21038128	CCT
	Lele30g1224	30	14977587	14980236	Lele31g1370	31	19544397	19547651	hybridization
	Lele30g1224	30	14977587	14980236	Lele32g0172	32	993991	996495	hybridization