Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g1222 ATGTACCCTCACTCTAACGCTACATTCGCGCGCGCCGCCAACTCCATCGATCATTTGCCGTCGCCAACAGCAGCCACCATGCCACTACCCTATCCTTCAGTTACTTCAATGCATTCCATATCCACTTCTCCGCAGCACCTCGTTCCCGACCAGCTCGCCGTCCCTGATTTCGACTCGCTGCTCAACTCGGAGATGAGCCTCAACAATAGTTGCTGCAGCGGTTGTAGCACCTATGGCTCGCCCAGTTCGCTGGTGACGTATAGAACTCAACGACCAAGCTTGATGCAGAGGAGCGTGAGCAGCCACTCGCTCCATAAGAATGAATATCTCAACCCTGTTTCTGCTCTGTTTGCCGAGTTCCAAAACTCCGACAACGGTCCGGTACGCAGAGCTCACAGTACTGGTGATTTGCAGAGGAATCATGGGTCAGAGATGGCATTGTCAAGCGAAAGTAGTATGATCATAGAAGGGATGAGCAGAGCATGCCGTTATAGCCCAGAGGAGAAGAAGGTGAGGATTGAGAGATATAGAAGCAAGCGAAATCTCAGAAACTTCAACAAGAAAATCAAGTATGCTTGCAGGAAAACATTAGCAGACAGCAGGCCACGCATCAGAGGAAGATTTGCGCGGAACGAAGAAACTGATAAGAACCCTGCCGTTCAGTGGAGCCATGAAAATGGTGTTGGAGCTGAGGAAGAAGATGAGGAAGAGGGCAATTGGGTTAATTTCTTTGATAATTTAGTTGCTGCAAATAATATTAATGTTCAAGAGCCTCAAGATACTACTTCCTTTGCTGCAGGATATCGGCATTGCATTTAG 819 0.4847 MYPHSNATFARAANSIDHLPSPTAATMPLPYPSVTSMHSISTSPQHLVPDQLAVPDFDSLLNSEMSLNNSCCSGCSTYGSPSSLVTYRTQRPSLMQRSVSSHSLHKNEYLNPVSALFAEFQNSDNGPVRRAHSTGDLQRNHGSEMALSSESSMIIEGMSRACRYSPEEKKVRIERYRSKRNLRNFNKKIKYACRKTLADSRPRIRGRFARNEETDKNPAVQWSHENGVGAEEEDEEEGNWVNFFDNLVAANNINVQEPQDTTSFAAGYRHCI 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g1222 272 Pfam CCT motif 171 211 IPR010402 GO:0005515
Lele30g1222 272 MobiDBLite consensus disorder prediction 127 149 - -
Lele30g1222 272 ProSiteProfiles CCT domain profile. 169 211 IPR010402 GO:0005515
Lele30g1222 272 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 10 228 IPR045281 GO:0009909
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g1222 Lele-ChrLele30 14966614 14968827 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g1222 165 216 C2C2-CO-like Transcription Factor Family AT5G15850 48.077 4.44e-12 63.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lele30g1222 CCT 2.1e-17 CL0281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele30g1222 30 14966614 14968827 Lele31g1369 31 19537276 19538382 hybridization
Lele30g1222 30 14966614 14968827 Lele32g0174 32 1004716 1006428 hybridization