Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g1216 ATGGGTTGTTTTCTCTGCACTCGCGAACCAGGCAACAAATCCTCCATTCACCACAATTCCAGAAGCCTCGTGCGCTACGATAAGACGACGCACCATTGCGCTATTGCAGATAAGGTTAAAGCAGACTCGAACGTGAATGTGAAAAAGGAAGTTATTTCTTCCAAGCCTGATCATGAACTTTCTCGGGAGATAAAGGCCTTAAATTTAGAAGCTAAAATTCCAAAGGATGGAAAAGTGAATGATCTGAATCGTGCAAAATCGTTCTCGTTCGATGAACTCGCAGCGGCAACAGGTCGTTTCAGGTCAGATTGCTTGTTGGGCGAAGGAGGTTTCGGGAAAGTTTACAAGGGATACTTGAAGAGAACGAAGCAGGTGGCGGCTATAAAGCAACTGGACCCAGATGGCCATCAAGGGAAAAGGGAATTTGTGGTGGAAGTGTTGACACTAAGTATGGCAGATCACCCTAATCTGGTCAAACTTTTAGGGTTTTGTGCCATGGGACAACAAAGGTTGTTGGTTTATGAGTACATGCCATTGGGATCCCTCGAGAATCATCTCTATGATCTTCCGGCGGGTAGAATAGCACTGGATTGGAACACGAGAATGAAAATAGCAGCAGGAACAGCGAGAGGTTTGGAATATCTGCATGATAAAATGAGGCCTCCGGTGATATACAGGGACCTAAAATGTTCCAACATATTGTTAGGAGAGGAATATCATCCCAAGTTGTCTGATTTTGGGTTGGCAAAAGTAGGGCCAAGTGGAGAAGACACACATGTTTCAACCAGGGTTATGGGCACATTTGGGTATTGTGCTCCAGATTATGCCATGACTGGTCAATTAACTTTTAAGTCCGACATTTACAGCTTCGGTGTTGTTCTTTTGGAGCTTATCACCGGCAAGAAAGCTTTTGACAAGTCAAGACCTTCCAAACAACAAAACCTCGTCTCTTGGGCGAGGCCAAAGTTCAAAGACAGGAAAAGATTCTCAGAAATGGTGGATCCGGCGCTGAAAGGACAATATCCAGTGAGAGGATTGTACCAAGCTCTGGCTATAGCAGCCATGTGTGTGCAAGAGAAGCCTCATATGAGACCTGTTATTGCTGATGTTGTCACTGCTCTCAACTTCCTAGCTTCCCAGAAATATGATCCCCACCATCAAATTTCACACGAGCCCAAATCCAGAACAAATCATCATCATACCCTTCTTCATGCTCATCTCTCTGAGTCAGACAGATCTGGGAACGAAGAAAATAGTTCTGATGAATCAGACAGATCTGGCACCCAACAAAACAGTTATGAGGCAGATAGATCTGAGAATGAAGGAAATAATTCTGAGTCTGACAGATCCGGGCACGGTGAAATTTAA 1368 0.4444 MGCFLCTREPGNKSSIHHNSRSLVRYDKTTHHCAIADKVKADSNVNVKKEVISSKPDHELSREIKALNLEAKIPKDGKVNDLNRAKSFSFDELAAATGRFRSDCLLGEGGFGKVYKGYLKRTKQVAAIKQLDPDGHQGKREFVVEVLTLSMADHPNLVKLLGFCAMGQQRLLVYEYMPLGSLENHLYDLPAGRIALDWNTRMKIAAGTARGLEYLHDKMRPPVIYRDLKCSNILLGEEYHPKLSDFGLAKVGPSGEDTHVSTRVMGTFGYCAPDYAMTGQLTFKSDIYSFGVVLLELITGKKAFDKSRPSKQQNLVSWARPKFKDRKRFSEMVDPALKGQYPVRGLYQALAIAAMCVQEKPHMRPVIADVVTALNFLASQKYDPHHQISHEPKSRTNHHHTLLHAHLSESDRSGNEENSSDESDRSGTQQNSYEADRSENEGNNSESDRSGHGEI 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g1216 455 SUPERFAMILY Protein kinase-like (PK-like) 86 403 IPR011009 -
Lele30g1216 455 FunFam Serine/threonine-protein kinase PBS1 177 392 - -
Lele30g1216 455 Pfam Protein kinase domain 104 371 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele30g1216 455 ProSitePatterns Serine/Threonine protein kinases active-site signature. 223 235 IPR008271 GO:0004672|GO:0006468
Lele30g1216 455 CDD STKc_IRAK 106 375 - -
Lele30g1216 455 ProSitePatterns Protein kinases ATP-binding region signature. 106 129 IPR017441 GO:0005524
Lele30g1216 455 MobiDBLite consensus disorder prediction 424 438 - -
Lele30g1216 455 ProSiteProfiles Protein kinase domain profile. 100 377 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele30g1216 455 Gene3D Phosphorylase Kinase; domain 1 70 176 - -
Lele30g1216 455 PANTHER OS07G0668900 PROTEIN 31 389 - -
Lele30g1216 455 SMART serkin_6 100 377 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele30g1216 455 FunFam probable serine/threonine-protein kinase RLCKVII 72 176 - -
Lele30g1216 455 MobiDBLite consensus disorder prediction 407 455 - -
Lele30g1216 455 Gene3D Transferase(Phosphotransferase) domain 1 177 401 - -
Lele30g1216 455 MobiDBLite consensus disorder prediction 407 423 - -
Lele30g1216 455 MobiDBLite consensus disorder prediction 439 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g1216 Lele-ChrLele30 14906183 14909364 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g1216 75 397 Glycoside Hydrolase AT3G07070 58.410 3.46e-140 406
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Lele30g1216 Pkinase 9.8e-46 CL0016