Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g1210 ATGTTAGATCTTAATCTTAATGCGGATTCGACTCAGAACCATGACTCGGTCATGTTCTTTGACAAATTTCCTGAAGCTTCGGCGAATGAAATGGAGGAATCGGGGACCTCTAATTCATCTGTTGTCAATGCCGACGGGTCCAGTACAGGAGGAGGCGATGATGACTCTTGCTCTACACGCGCTGGCGACGTTGTTACCTTCAATTTCGATATCCTCAAGGTGGACAGCGGTAAGGACGTCGCAACCAGGGAGTTGTTTACGGTGAGTGGAGCAAAAGGAGTAGATAGCGACTCCGGGAATTGGCAGGGTCAGTCTTCATCGCCCTTTCCATCAAATAAGAGCTGGATGGATCTCTCATTTGATAGCCAAAATGGCGGCACAGAGGCAAAGATGATTCAACTTCAGCAACAACCTCAGCCGCAGGTGAAGAAGAGCAGGAGAGGTCCAAGGTCTCGGAGCTCCCAGTACAGAGGAGTCACCTTCTATAGGAGGACTGGAAGATGGGAATCACATATCTGGGATTGTGGGAAACAAGTCTATTTAGGCGGTTTTGACACTGCACATGCCGCTGCTAGAGCCTACGATCGAGCTGCTATTAGATTCAGGGGAGTTGAAGCTGATATCAATTTCAACCTTAGTGATTATGAGGAGGATCTTAAACAGATGAAGAATCTCACCAAGGAGGAGTTTGTTCACATTCTTCGTCGCCAAAGTACTGGTTTCTCTAGGGGTAGCTCAAAATACCGGGGGGTAACACTGCACAAATGTGGACGCTGGGAAGCTCGGATGGGACAACTTCTTGGCAAAAAGTATATATACCTTGGGCTGTTCGACAGCGAAGTAGAAGCTGCAAGGGCATACGATAAAGCAGCCATTAAGTGCAATGGAAGGGAGGCAGTAACTAACTTTGAGCCAAGTGCTTATGAAGGAGAGTTGAATACTGAAGCGACCAATGAAGGTGTCAGTCACAATCTTGACCTCAATTTAGGCATAGCTACCCCAGGCAAAGGTCTAAATGAAAGCGGGGGCAATCCTGAGCTCGAGTCTTATCCTTACAATATGCATGCCAGAACAAGTTCGAGGATAGAGACCAACACCGACTCGGTAATTGGCGATCAAGCTTTGAAAAAGCTTGTAGTAACTGGAGATCGCCTTTCTGTATGGAATGGCATATATCCAAATTTCTTTCCCAGTGAGGAAAGAGCAGAGAGAATGAGCACAGGACAGCCCAACTGGACGTGGCGAAGGCATGGCCGGCTTAGTGGGAGCACAGTTCCACAGTTCTCTACTGCAGCATCATCAGGATTCTCCATTTCATCCACTGCCATCTTCCCGCCTAAACCTACGAACTCACTTCCCCTCACTCTCTCTTTTTCTTCTTCATCCACTTCAGCTGCCCCCACCGCATCTCAATATTATTACCACATGAAGCACCCGCATCCACCACCCTAG 1452 0.4793 MLDLNLNADSTQNHDSVMFFDKFPEASANEMEESGTSNSSVVNADGSSTGGGDDDSCSTRAGDVVTFNFDILKVDSGKDVATRELFTVSGAKGVDSDSGNWQGQSSSPFPSNKSWMDLSFDSQNGGTEAKMIQLQQQPQPQVKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIRFRGVEADINFNLSDYEEDLKQMKNLTKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQLLGKKYIYLGLFDSEVEAARAYDKAAIKCNGREAVTNFEPSAYEGELNTEATNEGVSHNLDLNLGIATPGKGLNESGGNPELESYPYNMHARTSSRIETNTDSVIGDQALKKLVVTGDRLSVWNGIYPNFFPSEERAERMSTGQPNWTWRRHGRLSGSTVPQFSTAASSGFSISSTAIFPPKPTNSLPLTLSFSSSSTSAAPTASQYYYHMKHPHPPP 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g1210 483 ProSiteProfiles AP2/ERF domain profile. 155 211 IPR001471 GO:0003700|GO:0006355
Lele30g1210 483 MobiDBLite consensus disorder prediction 92 120 - -
Lele30g1210 483 CDD AP2 246 306 IPR001471 GO:0003700|GO:0006355
Lele30g1210 483 PRINTS Ethylene responsive element binding protein signature 286 306 IPR001471 GO:0003700|GO:0006355
Lele30g1210 483 PRINTS Ethylene responsive element binding protein signature 248 259 IPR001471 GO:0003700|GO:0006355
Lele30g1210 483 MobiDBLite consensus disorder prediction 30 55 - -
Lele30g1210 483 Gene3D AP2/ERF domain 246 305 IPR036955 GO:0003700|GO:0006355
Lele30g1210 483 Gene3D AP2/ERF domain 154 212 IPR036955 GO:0003700|GO:0006355
Lele30g1210 483 MobiDBLite consensus disorder prediction 132 156 - -
Lele30g1210 483 MobiDBLite consensus disorder prediction 93 120 - -
Lele30g1210 483 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 112 341 - -
Lele30g1210 483 FunFam AP2-like ethylene-responsive transcription factor 154 213 - -
Lele30g1210 483 SMART rav1_2 247 310 IPR001471 GO:0003700|GO:0006355
Lele30g1210 483 SMART rav1_2 155 217 IPR001471 GO:0003700|GO:0006355
Lele30g1210 483 SUPERFAMILY DNA-binding domain 154 212 IPR016177 GO:0003677
Lele30g1210 483 ProSiteProfiles AP2/ERF domain profile. 247 304 IPR001471 GO:0003700|GO:0006355
Lele30g1210 483 MobiDBLite consensus disorder prediction 28 57 - -
Lele30g1210 483 FunFam AP2-like ethylene-responsive transcription factor 246 306 - -
Lele30g1210 483 Pfam AP2 domain 155 203 IPR001471 GO:0003700|GO:0006355
Lele30g1210 483 Pfam AP2 domain 246 296 IPR001471 GO:0003700|GO:0006355
Lele30g1210 483 SUPERFAMILY DNA-binding domain 246 305 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g1210 Lele-ChrLele30 14851509 14854572 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g1210 137 330 AP2-EREBP Transcription Factor Family AT4G36920 82.741 1.30e-99 304
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Lele30g1210 AP2 3e-09 CL0081