Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g1202 ATGCAGACCCCCAAGACAAGGAGTGGATCCTCTGAAGTGCCTCAAAAGGTCTCTCCTCGCGCTGTTCGCCAACTCAGGCCTAGTCCTCTAGAGACGAACTCTGCTTCTTCGTTTAGTCTAGCTACTAGAGCCTCAAAAGAAAGAAGCCCCAAAGTCACTGATCGCAGATCACCCAGAAGCCCAGTTCCGGAGAGGAAGCGCCCCAGCAGAATCTCTGAATTGGAATCTCAGGTTTCTCAACTTCAGGAAGATTTAGAGAAAGTGAGGAATCAGCTCAGTCTATCAGAATCATGCAAAAGACAAGCCCAGCAAGAAGCTGAGGAATCCAAGGGGCAACTTCTGTCCCTGTCGGAAAAACTCAGAGATTCTCAGAAGCAGCATGAAGAACTCTCCGCCATTAAAGAAGTTCATGTAATTGAGCCTCAGAAAACCGAAGAACATGACGAAGCTTGGCAATATGAGGTCAAGGCTGCCATGACTGAAATCCAGCAGCTCAAGGCCCAACTTGAATTGATTACTACTTGTGAGAATGCTCAAAACCAGCATACAGAATCAGCCAATTTGGAACTACTGAATCTGAAAGAAAGTTTGGCAAAAACCCTTTCTTTTATAGAGGACATGAAGAACCAGCTTAGGGAATGCAAGGAATCAGAAGCTCAAGCCCAAGCTCTGGTCAATGAAACTCTGCATCAACTTGAGGCTGCAAAAAGAACTGTAGAGTTGTTAAGGGCTGATTCTGCAAGAGCTTTAGAAGGCTACAACTCCATTGCGTTAGAGTTAGACCAGTCTAGAGCAAGAGTGAATTCACTAGAAGCACTTGTGAGCAACCTTGAAAATTTGAAGGCAGAGGATCCAAATAAGATCGAAGGGGATATTTATTCTCTAAAGTCTGAGATAACAGAGCTGAGATCTGCATTAGAAATTGCTGAGACTAAGTACCAAGAAGAACAGATTCGGTATACAGTGGAGGTCAGAAATGCCTATGAGTTGATGGAGAAAATAAAATCAGAATCAACCCACAATCAAACTGAGCTTGAGGCTGAGCTGAATAAAATAAAAGCTGAGATTGAAGAGTTGAAAGCAAACCTAATGGACAAGGAAACCGAATTGCAAGGTATAGTTGAAGAGAATGAGAATTTGAACTCGAAGCTCGAGAAGAGCCTATCAGCACATAGAGAAAAAGAGCTCAAAAAGGAAGTTAAACAATTAGAGGAATGTGTGGCTGAACTGAAGGCCGATTTAATGGACAAGGAGACAACGTTACAAAGCATATCAGAAGAGAATGAGACGCTGAAGATAGAAATCAAGAGGAGGTTCAGTGACGGTGGGAGAGTTAGAGAGGAAGTGGAGGCAGCGAAGGAAGCAGAAAAAGAGGCTCTTATGAAACTGGGGATTGCGATGGAAGAAGCGGATAGGAGCCAGAGAAAAGCAGAGAGGGTGGGAGAGCAATTAGAAGCAGCACAAGCGGCAAACTCAGAAATGGAAGCTGAATTGAGGAGATTGAAGGTTCAGTCCGATCAATGGAGAAAAGCAGCAGAAGCAGCCGCAGCTATGCTTTCAGCAGGGGGAGGAAACAAAAACAATGGGAATCTCGCGGAGAGAGTTGTGTCTTTGGACGGCAACTATAACAATAACCATCTTATGGGCAAGTGTTCATCTTATGTTGAAGACATGGATGAGGATTTTCAGCACAAGAAAAATGGCAACATGTTGAAGAAGATTGGAGTCTTATGGAAGAAGCCTCAGAAATAA 1752 0.4389 MQTPKTRSGSSEVPQKVSPRAVRQLRPSPLETNSASSFSLATRASKERSPKVTDRRSPRSPVPERKRPSRISELESQVSQLQEDLEKVRNQLSLSESCKRQAQQEAEESKGQLLSLSEKLRDSQKQHEELSAIKEVHVIEPQKTEEHDEAWQYEVKAAMTEIQQLKAQLELITTCENAQNQHTESANLELLNLKESLAKTLSFIEDMKNQLRECKESEAQAQALVNETLHQLEAAKRTVELLRADSARALEGYNSIALELDQSRARVNSLEALVSNLENLKAEDPNKIEGDIYSLKSEITELRSALEIAETKYQEEQIRYTVEVRNAYELMEKIKSESTHNQTELEAELNKIKAEIEELKANLMDKETELQGIVEENENLNSKLEKSLSAHREKELKKEVKQLEECVAELKADLMDKETTLQSISEENETLKIEIKRRFSDGGRVREEVEAAKEAEKEALMKLGIAMEEADRSQRKAERVGEQLEAAQAANSEMEAELRRLKVQSDQWRKAAEAAAAMLSAGGGNKNNGNLAERVVSLDGNYNNNHLMGKCSSYVEDMDEDFQHKKNGNMLKKIGVLWKKPQK 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g1202 583 Coils Coil 71 126 - -
Lele30g1202 583 MobiDBLite consensus disorder prediction 1 78 - -
Lele30g1202 583 Coils Coil 467 511 - -
Lele30g1202 583 MobiDBLite consensus disorder prediction 1 17 - -
Lele30g1202 583 Coils Coil 292 319 - -
Lele30g1202 583 Coils Coil 335 434 - -
Lele30g1202 583 MobiDBLite consensus disorder prediction 27 46 - -
Lele30g1202 583 Coils Coil 260 280 - -
Lele30g1202 583 MobiDBLite consensus disorder prediction 47 72 - -
Lele30g1202 583 Coils Coil 204 245 - -
Lele30g1202 583 PANTHER INTERACTOR OF CONSTITUTIVE ACTIVE ROPS 2, CHLOROPLASTIC-RELATED 1 583 IPR029688 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g1202 Lele-ChrLele30 14793299 14797217 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g1198 09 20931760 20942696 Lele30g1202 30 14793299 14797217 CCT
Lele10g1175 10 22939396 22948718 Lele30g1202 30 14793299 14797217 CCT
Lele30g1202 30 14793299 14797217 Lele31g1345 31 19376366 19380596 hybridization
Lele30g1202 30 14793299 14797217 Lele32g0193 32 1166703 1170611 hybridization