Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g1191 ATGAGCGTCATAGATATTATCTTCCGGGTCGATTCGATATGCCAGAAATACGACAAATATGACATCGATAAGCAGCGAGAGCTCAATGCATACGGTGACGATGCCTTTGCTCGCCTCTACGCTGCCGTTGAAAGTAACATCCAAGCCGCCCTCAATAAATCGGAGATTGCTTCCAATGAGAAGAACAGGGCATCTGCAGCGGCAATGAATGCGGAAGTTCGTCGGACAAAAGCTCAACTCATGGACGAAGTCCCGAAGCTTCGTAAACTGGCTCAAAAGAAGGTTAAGGGTCTCTCAAGTGAAGAAATGGCCACTCGGAGTGATATGGTTCTGGCATTGCCAGAAAGGATCCAAGCCATACCAGATGGTATCGCCGGCGCAGCTAATCAAGCTGCAGGAGGGTTTTCTGATGCTTCATCTCATCAGAACATTAAGTTTGATTCATCAGAAGGATACAAGGAGGATCTATATTACCAACAAACTGAAGAATCAAGTCAGTTTAGATCAGAGTATGAGATGCGCAAAATGAAACAGGATGAAGGGCTTGATATCATATCAGAAGGATTGGATACGTTGAAGAATTTGGCCCTTGATATGAATGAGGAATTGGACCGGCAAGTTCCTTTAATGGATGAAATTGGTACAAAGGTAGATAAGGCCACAGACGAGCTTAGAAATAATAACGCGAGGCTGAAGAAAACTCTCAACCAGGTGAGGTCTAGTCGAAATTTTTGCATTGACATCATTCTGCTGTGTGTTCTCCTTGGCATTCTTTCCTACATATACAATGTACTGAGGCAGTGA 804 0.4415 MSVIDIIFRVDSICQKYDKYDIDKQRELNAYGDDAFARLYAAVESNIQAALNKSEIASNEKNRASAAAMNAEVRRTKAQLMDEVPKLRKLAQKKVKGLSSEEMATRSDMVLALPERIQAIPDGIAGAANQAAGGFSDASSHQNIKFDSSEGYKEDLYYQQTEESSQFRSEYEMRKMKQDEGLDIISEGLDTLKNLALDMNEELDRQVPLMDEIGTKVDKATDELRNNNARLKKTLNQVRSSRNFCIDIILLCVLLGILSYIYNVLRQ 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g1191 267 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 172 234 IPR000727 -
Lele30g1191 267 Pfam SNARE domain 209 258 IPR000727 -
Lele30g1191 267 PANTHER SYNTAXIN 44 253 IPR045242 -
Lele30g1191 267 Gene3D - 172 233 - -
Lele30g1191 267 ProSitePatterns Syntaxin / epimorphin family signature. 178 217 IPR006012 GO:0005484|GO:0006886|GO:0016020
Lele30g1191 267 SUPERFAMILY SNARE fusion complex 165 233 - -
Lele30g1191 267 Coils Coil 217 241 - -
Lele30g1191 267 SMART tSNARE_6 167 234 IPR000727 -
Lele30g1191 267 CDD SNARE_Qc 177 233 - -
Lele30g1191 267 FunFam Syntaxin 6 179 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g1191 Lele-ChrLele30 14723062 14724957 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g1191 1 266 SNARE and Associated Proteins AT3G09740 66.667 2.83e-132 373