Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g1190 ATGGTGGAGGATCAAGATCAAATAGTGCGCTTTAACAACACTTTTCCACCTGGTTTTAGGTTCCATCCATTTGACGAAGAACTCATAGTTCATTATTTGAAGAAGAAGATCAACTCGCTTCCACTTCCAGCACCTATTGTTGCTGAAATTGATCTTTATAGGTTTAACTCATGGTACCTACCTGATTATCAAATCTTTGCTTCTGTCAGTCCTCAGATAACAATCCCTTCGTTGGACTATGGTTGCTTCGACTCACTGAAAAGAACGTCAAATGAAGATAGTCAACGTGGAAATGTCATTTCTTTTGACAGTAGCTGCAGGCCAAACCCTGAGAACAAGATTGATAATCTTCCAGATTCAAACTGTTCTAGTAGCCAAAGTCTGTTTAATGAGGGAGTTCTAATTGGTCAGAGAATTCTAGATCCCAGCATCAATTTTCAAGAACTGAATGAATTACCCTTTACAGCAGGAAGGTTCATGCAATAA 486 0.3889 MVEDQDQIVRFNNTFPPGFRFHPFDEELIVHYLKKKINSLPLPAPIVAEIDLYRFNSWYLPDYQIFASVSPQITIPSLDYGCFDSLKRTSNEDSQRGNVISFDSSCRPNPENKIDNLPDSNCSSSQSLFNEGVLIGQRILDPSINFQELNELPFTAGRFMQ 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g1190 161 SUPERFAMILY NAC domain 12 66 IPR036093 GO:0003677|GO:0006355
Lele30g1190 161 Pfam No apical meristem (NAM) protein 16 64 IPR003441 GO:0003677|GO:0006355
Lele30g1190 161 ProSiteProfiles NAC domain profile. 15 161 IPR003441 GO:0003677|GO:0006355
Lele30g1190 161 PANTHER NAC TRANSCRIPTION FACTOR 56 15 63 - -
Lele30g1190 161 Gene3D NAC domain 25 101 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g1190 Lele-ChrLele30 14721225 14722301 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g1190 15 67 NAC Transcription Factor Family AT1G61110 66.038 1.22e-19 82.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele30g1190 NAM 5.6e-10 No_clan