Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g1171 ATGATTTGGCTGAAGGAGCCATTCTTTTCAACTACGAATGAATTGATTGCATTCTGCACCATTGTATTTATTGGTTGTCATCTGAGAAGTCTTTGGTTCCAATGCCAATGCAAAGCTGAAGCTTTGTTCACTTTCAAGATTACTCTTGGTAGTCCACAGCAAATCTCATGTAGTATTGCAAAATATCCATGTCAAAGGCAAAGGAAGCGTCTTCACTTCCATGAACTAAAAGATCCAGGTGCTTTTCATTTGTATAACGGGGTACCGGCAAAGATAGATGGGACAAATGAAGTTCCAACACTTACGCCATTACAAGAAGCTCAAGTTAAAAAACCTGGAAGAACTAGGGTTGCTGCCATTGTTGGTGGTGCTGCTGCTGCTTTAGTTGTGATTGTCATAGTAGTAATTGTTTATGCCTGTTTGATGCGTGTTAAGAGATTTATAAGGCAAACAACTGACACTGCTTCTTCTTCTCCATCTCCAACTGTTGAATTGGGAATAGCCAGCACCTCACAGGACATAAGGCCGTTCACAATCATGGAACTTGACCAAGCCACAAGAAATTTTAGTGAAAGTAACCTTGTAGGTGACGGTAGATTTGGTTTGGCTTACAAGGGTTTACTTCAAGATGGATCTATTGTTGCTATAAAAAGGCGCCAATATGCTTTAACTCACAGTTTCATCCCTAAGGTGATGAAAATAGCTAAAATTCATCATGTCCATCTTGTGAAGCTTATTGGTTATTATGAAGATGGCTATCAACAGTTACTTGTGCATGAATATCTTCCTAATGGAAATGTAGGGAATCACCTATATGATAGTGAAGGTTTACCAATTGGAAGGTTAGATATGCAGCGAAGATTATCTACAGGTTTGAGTGCTTCAAAAGGAATGGAACATCTTCACCGCTTGGTTCCACCTTTGGTGCACACAAATTTCAGAACTAGCAATGTTCTTGTGGATGAAAGCTTCAATGCCAAGGTTTCTGATTATGGACTCTGCAAGCTGCTAATCACTAATTCTGGCTCATCCTCAAACACAGATTGCTTTCATGACCCAGAGTTGAAACAATCGAAGGATTTCTCAAAGAAGAGTGATGTATACAGTTTTGGGGTCTTCTTACTTGAATTGATTAGTGGACGAGAAGTGCATAACAGAAGCCTCTCAAACTCACAAGAGAATCTGGTATTTCAGGTTAAGAACAGCCATGGCGTTTTGGAGGAGTTTGTGGACACAACACTAGGAAGCCATGAAAAGCAAGCTGCGAAGAAGGTGATGAAGTTGGCGATGATGTGTTTAAACGAGAGTATTACATTAAGACCATCAATGGGACAAATTGTACGGGAGATGGAGCAGATTCAAAGGGAATTTAGTGCTTTGCATTCTAATAACAATGAGGAGATTGGTGGTGTCACTCTTGGGAGTGATCTCTTCAAGTAA 1440 0.4007 MIWLKEPFFSTTNELIAFCTIVFIGCHLRSLWFQCQCKAEALFTFKITLGSPQQISCSIAKYPCQRQRKRLHFHELKDPGAFHLYNGVPAKIDGTNEVPTLTPLQEAQVKKPGRTRVAAIVGGAAAALVVIVIVVIVYACLMRVKRFIRQTTDTASSSPSPTVELGIASTSQDIRPFTIMELDQATRNFSESNLVGDGRFGLAYKGLLQDGSIVAIKRRQYALTHSFIPKVMKIAKIHHVHLVKLIGYYEDGYQQLLVHEYLPNGNVGNHLYDSEGLPIGRLDMQRRLSTGLSASKGMEHLHRLVPPLVHTNFRTSNVLVDESFNAKVSDYGLCKLLITNSGSSSNTDCFHDPELKQSKDFSKKSDVYSFGVFLLELISGREVHNRSLSNSQENLVFQVKNSHGVLEEFVDTTLGSHEKQAAKKVMKLAMMCLNESITLRPSMGQIVREMEQIQREFSALHSNNNEEIGGVTLGSDLFK 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g1171 479 Pfam Protein tyrosine and serine/threonine kinase 193 449 IPR001245 GO:0004672|GO:0006468
Lele30g1171 479 Gene3D Phosphorylase Kinase; domain 1 151 261 - -
Lele30g1171 479 SUPERFAMILY Protein kinase-like (PK-like) 171 456 IPR011009 -
Lele30g1171 479 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 26 - -
Lele30g1171 479 Gene3D Transferase(Phosphotransferase) domain 1 262 472 - -
Lele30g1171 479 ProSiteProfiles Protein kinase domain profile. 189 453 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele30g1171 479 ProSitePatterns Protein kinases ATP-binding region signature. 195 217 IPR017441 GO:0005524
Lele30g1171 479 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 126 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g1171 Lele-ChrLele30 14617614 14621258 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g1171 177 447 Glycoside Hydrolase AT3G07070 38.328 5.13e-52 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXa Lele30g1171 PK_Tyr_Ser-Thr 5e-33 CL0016