Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g1163 ATGGCAATGGCTGTGGCTCACCACAGAGAAAGCAGCAGCGGGAGCATCAGCAAGCACCTTGATTCCGGCAAGTATGTCCGATACACAGCGGAGCAAGTTGAAGCGCTCGAACGCGTTTACGCCGAGTGCCCAAAGCCCAGCTCCTTGCGAAGGCAACAACTGATCCGAGAGTGCCCTATTCTTGCGAACATCGAGCCCAAGCAGATCAAAGTTTGGTTCCAAAATCGCAGGTGCAGAGAGAAGCAGAGAAAAGAGGCAGGACGGCTCCAGACGGTGAACAGGAAACTGGCAGCTATGAACAAGTTATTGATGGAGGAAAATGAGCGGTTGCAAAAACAGGTTTCCCAACTAGTATGCGAAAATGGGTTCATGAGGCAGCAATTGCATAGTTCGTCAGCAGCAACTACTGATGCAAGTTGTGATTCGGTGGTCACCACCCCTCAACACTCCTTAAGAGATGCCAATAACCCTGCTGGACTCCTATCAATTGCAGAGGAGACCTTGGCAGAGTTCCTTTCAAAGGCTACTGGAACTGCTGTCGATTGGGTCCAGATGCCTGGGATGAAGCCTGGTCCGAATTCTGTTGGGATCTTTACCATTTCGCGAAGTTGCAGTGGAGTGGCAGCTCGAGCATGCGGTCTTGTTAGTTTAGAACCTGCAAAGATTGCGGAGATCCTAAAAGATCGTTCATCTTGGTTCCGGGACTGCCGGAGTCTTGAAGTATTTACATTGTTCCCTGCCAGCAATGGTGGGACAATTGAACTCATTTACACACAGACATATGCTCCAACTACGTTGGCTCCCGCACGGGATTTCTGGACTCTAAGATACACTACAAGTTTGGACAATGGAAGTCTTGTGGTGGGTGCTGGCCCTAATGCAGTGGCTGCTGCTCAGTTTGTGAGAGCTGAAATGCTCCCAAGCGGCTACCTGATTCGACCATGTGAAGGTGGAGGATCAATCATCCATATTGTAGACCACTTAAATCTCGAGGCGCTACGCTATATAAGACAAATAGCTCAGGAAACAAGTGGCGAAGTTGCTTATGGTTTAGGTAGGCAGCCTGCTGTTCTGCGGACTTTCAGCCAAAGGCTAAGCAGAGGCTTCAATGACGCTGTCAATGGGTTTAATGATGATGGCTGGTCCATGATGAACTGTGATGGTGCTGAGGACGTGATTATTGCAGTCAACTCAACCAAGAATCTGAGTGCCACTTCTAATCCTGCAAGTTCCCTAACATTCCTTGGAGGAGTTCTCTGTGCGAAAGCTTCCATGTTGCTGCAGAATGTCCCTCCAGCAGTTTTGGTTCGGTTTTTGAGGGAGCATCGCTCTGAGTGGGCTGATTTCAATGTTGATGCCTATTCTGCTGCATCACTTAAAGCAGGCTCCTTTGCCTATCCTGGCATGAGGTCAACTAGATTCACGGGAAGTCAAATTATCATGCCTCTTGGTCATACAATTGAACATGAAGAGATGCTTGAAGTTGTTCGTCTTGAAGGCCAGTCTCTAGCTCCGGAAGAGGCTTTTGTTTCAAGGGACATTCATCTCTTACAGATATGTAGTGGGATTGATGAAAATGCTGTTGGGGCATGTTCTGAGCTCGTATTTGCTTCAATTGATGAAATGTTCCCTGATGATGCTCCATTGTTGCCATCGGGTTTCCGCATCATCCCGTTGGATTCAAAATCAGTTGAGTTCCGTTTATGTGTTCAGGGTGATAAGAAGAATGCAGTCTCTGTAAATAGGACCCTAGATTTGACATCTGGTCTTGATGTGGGCCCAGCAACAAATCATGCTGCAGAAGATGCATCATCATGCCATAATACTCGGTCGGTGTTGACTATTGCCTTTCAGTTTCCTTTTGAGAGCAGCTTGCAGGAAAACGTTGCAATTATGGCACGACAGTATGTGCGCAGTGTGATTTCATCTGTGCAGAGGGTTGCCATGGCTATATCTCCATCTGGTATAAGCCCACCTTTGGGATCAAAACTCAGTCCTGGCTCTCCTGAAGCAGTTACTCTAGCTCACTGGATATGCCAGAGTTATAGTTTCTATATGGGAGCAGAATTACTTAGATCTGATTCTCTTGGTGGCGATTTGTTGCTGAAACAATTATGGCATCATCAGGATGCCATTTTGTGTTGTTCTGTGAAGTTGCTCAAAAGTTTGTGTCTTTATTTGGCATATTTGGCATCGCAGTCGGTGCCCGTGTTCATCTTTGCAAACCAGGCAGGGCTTGACATGCTGGAAACAACTCTAGTAGCTTTGCAAGATATCACCATGGATAAAATATTTGACGACTCAGGACGCAAGGCATTGTGTACAGAATTTGCCAAGTTGATGCAGGAGGGGTTCTCTTATCTGCCTGCCGGAATTTGCATGTCCATGATGGGACGGCATGTTTCGTATGAACAAGCTCTCGCATGGAAAGTTCTTGCTGAAGATAACAGTGTTCATTGCTTAGCTTTCTCTTTCATAAACTGATTTCGGTGTTTTGGAAAGATGGCGATGGCTGTGGCTCCCCAAAGAGAAAGCAGCAGCGGGAGCATTAGCAAGCACCTTGATTCTGGCAAGTATGTCCGATACACTGCGGAGCAGGTTGAAGCGCTCGAACGCGTTTACGCGGAGTGCCCGAAGCCCAGCTCCTTGCGCAGGCAACAGCTGATCCGAGAATGCCCTATTCTTGCCAACATCGAACCCAAGCAGATCAAAATTTGGTTCCAAAATCGCAGGTGTAGAGAGAAGCAGAGAAAGGAGTCAGGGCAGCTTCAAACTGTGAACAGAAAACTGTCTGCGATGAACAAGTTGTTGATGGAGGAAAATGAGCGGTTGCAAAAGCAGGTTTCCCAACTAGTATGCGAAAATGGGTTTATGAGGCAGCAATTGCATAGTGCTTCAGCAGCAAATACTGATGCAAGTTGTGATTCGGTGGCCACCACACCTCAACACTCCTTGAGAGATGCCAATAACCCTGCTGGACTCATATCAATCGCAGAGGAGACCTTGGCAGAGTTCCTTTCAAAGGCTACGGGAACTGCTGTTGAATGGGTCCAGATGCCTGGGATGAAGCCTGGTCCGGATTCTGTTGGGATCTTTGCCATTTCGCGAAGTTGCAGTGGAGTGGCAGCTCGAGCGTGTGGTCTTGTTAGTTTAGAACCTACTAAGATTGCGGAGATCCTAAAAGATCGTCTATCTTGGTTTCGGGACTGTCGGAGTCTAGAAGTTTTTACAAAGTTCCCTGCTGGAAATGGTGGAACAATTGAACTCGTGTACACACAGACATATGCCCCAACTACATTGGCTCCTGCCCGGGATTTCTGGACTCTGAGATACACTACAAGTTTGGACAATGGAAGTCTTGTGGTTTGTGAGAGATCACTGTCTGGTTCAGGTGCTGGCCCTAACGCAGCAGCTGCTTCTCAGTTTGTTAGAGCTGAAATGCTCCCAAGTGGTTACCTGATTCGACCATGTGAAGGTGGAGGATCAATCATCCACTTTGTAGACCATTTAAATCTCGAGGCATGGAGTGTGCCAGAGGTGCTGAGACCACTTTATGAATCATCAAAAATGGTTGCTCAAAAAATGACAATTGCTGCACTACGCTATGTCAGGCAGATAGCTCAGGAAACAAGTGGTGAAGTCGTTTATGGTTTAGGTAGGCAGCCTGCTGTTCTGCGAACTTTCAGCCAAAGGCTGAGCAGAGGCTTCAATGACGCTGTCAATGGATTTAATGATGATGGCTGGTCCATAATGAACTGCAATGGTGCTGAGGACGTGATTATTGCAGTCAACTCAACCAAAAATCTGAGTTCCACTTCTAATCCTGCAAGTTCCCTAACATTCCTTGGAGGTGTTCTCTGCGCGAGAGCTTCGATGTTGCTCCAGAATGTCCCTCCAGCAGTTTTGGTTCGGTTTCTGAGGGAGCACCGTTCTGAGTGGGCCGATTTCAATGTTGATGCCTATTCTGCTGCATCACTTAAAGCAGGCGCCTTTGCCTATCCTGGCATGAGGTCAACTAGATTCACGGGAAGTCAAATTATCATGCCTCTTGGCCATACAATTGAACATGAAGAGGTGCTTGAAATTGTCCGTCTTGAAGGCCTCCCTCTTGCTCAGGAAGACGGTTTTGCTTCTAGGGACATTCATCTCTTACAGATATGTAGTGGGATTGATGAAAATGCTGTTGGGGCATGTTCTGAGCTCGTATTTGCTTCAATTGATGAAATGTTCCTTGATGATGCTCCATTGTTGCCCTCGGGTTTCCGCATCATCCCATTGGATTCAAAATCAGGCGATAAGAAGGATGCAGTATCTGTAAATCAGACCCTAGAATTGACATCTGGCCTTGAAGCAGGCCAAGCAAGAAATCATGCTACAGGAGATGCATCATCATGCCATAATACTCGGTCGGTGTTGACAATTGCCTTTCAGTTTCCTTTTGAGAGCAGCTTGCAGGAAAACGTTGCAATTATGGCACGACAGTATGTGCGCAGTGTGATTTCATCTGTGCAGAGGGTTGCCTTGGCTATATCTCCATCTGGTATAAGCCTGCCTGTGGGACCAAAACTCAGTCCTGGCTCTCCTGAAGCAGTCACTCTAGCTCATTGGATATGCAGGAGCTATAGTTTCTACCTGGGAGCAGAATTATTGAGATCTGATTCTCTTGTTGGCGATTTGTTGCTGAAACATTTATGGCATCATCAGGATGCCATTTTGTGTTGTTCAGTGAAGTCGGTGCCTGTGTTCATCTTTGCAAACCAGACAGGGCTTGACATGCTGGAAACAACTCTAGTAGCTTTGCAAGATATCACACTGGATAAAATATTTGACGACTCTGGACGCAAGGCATTGTGCACAGAATTTGCCAAGTTGATGGAGGAGGGTTTCACATATCTACCTGCTGGAATTTGCATGTCGATGATGGGACGGCATGTTTCGTATGAACAAGCTCTGGCATGGAAAGTTCTCGCTGAAGATAACAGTGTTCATTGCCTAGCGTTCTCTTTCATAAATTGGTCATTTGTATGA 5028 0.4686 MAMAVAHHRESSSGSISKHLDSGKYVRYTAEQVEALERVYAECPKPSSLRRQQLIRECPILANIEPKQIKVWFQNRRCREKQRKEAGRLQTVNRKLAAMNKLLMEENERLQKQVSQLVCENGFMRQQLHSSSAATTDASCDSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPNSVGIFTISRSCSGVAARACGLVSLEPAKIAEILKDRSSWFRDCRSLEVFTLFPASNGGTIELIYTQTYAPTTLAPARDFWTLRYTTSLDNGSLVVGAGPNAVAAAQFVRAEMLPSGYLIRPCEGGGSIIHIVDHLNLEALRYIRQIAQETSGEVAYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSMMNCDGAEDVIIAVNSTKNLSATSNPASSLTFLGGVLCAKASMLLQNVPPAVLVRFLREHRSEWADFNVDAYSAASLKAGSFAYPGMRSTRFTGSQIIMPLGHTIEHEEMLEVVRLEGQSLAPEEAFVSRDIHLLQICSGIDENAVGACSELVFASIDEMFPDDAPLLPSGFRIIPLDSKSVEFRLCVQGDKKNAVSVNRTLDLTSGLDVGPATNHAAEDASSCHNTRSVLTIAFQFPFESSLQENVAIMARQYVRSVISSVQRVAMAISPSGISPPLGSKLSPGSPEAVTLAHWICQSYSFYMGAELLRSDSLGGDLLLKQLWHHQDAILCCSVKLLKSLCLYLAYLASQSVPVFIFANQAGLDMLETTLVALQDITMDKIFDDSGRKALCTEFAKLMQEGFSYLPAGICMSMMGRHVSYEQALAWKVLAEDNSVHCLAFSFINXFRCFGKMAMAVAPQRESSSGSISKHLDSGKYVRYTAEQVEALERVYAECPKPSSLRRQQLIRECPILANIEPKQIKIWFQNRRCREKQRKESGQLQTVNRKLSAMNKLLMEENERLQKQVSQLVCENGFMRQQLHSASAANTDASCDSVATTPQHSLRDANNPAGLISIAEETLAEFLSKATGTAVEWVQMPGMKPGPDSVGIFAISRSCSGVAARACGLVSLEPTKIAEILKDRLSWFRDCRSLEVFTKFPAGNGGTIELVYTQTYAPTTLAPARDFWTLRYTTSLDNGSLVVCERSLSGSGAGPNAAAASQFVRAEMLPSGYLIRPCEGGGSIIHFVDHLNLEAWSVPEVLRPLYESSKMVAQKMTIAALRYVRQIAQETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSIMNCNGAEDVIIAVNSTKNLSSTSNPASSLTFLGGVLCARASMLLQNVPPAVLVRFLREHRSEWADFNVDAYSAASLKAGAFAYPGMRSTRFTGSQIIMPLGHTIEHEEVLEIVRLEGLPLAQEDGFASRDIHLLQICSGIDENAVGACSELVFASIDEMFLDDAPLLPSGFRIIPLDSKSGDKKDAVSVNQTLELTSGLEAGQARNHATGDASSCHNTRSVLTIAFQFPFESSLQENVAIMARQYVRSVISSVQRVALAISPSGISLPVGPKLSPGSPEAVTLAHWICRSYSFYLGAELLRSDSLVGDLLLKHLWHHQDAILCCSVKSVPVFIFANQTGLDMLETTLVALQDITLDKIFDDSGRKALCTEFAKLMEEGFTYLPAGICMSMMGRHVSYEQALAWKVLAEDNSVHCLAFSFINWSFV 1675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g1163 1675 Gene3D - 1032 1212 IPR023393 -
Lele30g1163 1675 Gene3D - 195 347 IPR023393 -
Lele30g1163 1675 SUPERFAMILY Bet v1-like 996 1208 - -
Lele30g1163 1675 CDD homeodomain 858 918 IPR001356 GO:0003677
Lele30g1163 1675 ProSiteProfiles 'Homeobox' domain profile. 853 917 IPR001356 GO:0003677
Lele30g1163 1675 ProSiteProfiles START domain profile. 153 367 IPR002913 GO:0008289
Lele30g1163 1675 SUPERFAMILY Bet v1-like 379 574 - -
Lele30g1163 1675 FunFam Homeobox-leucine zipper protein REVOLUTA 24 79 - -
Lele30g1163 1675 Coils Coil 89 120 - -
Lele30g1163 1675 SUPERFAMILY Homeodomain-like 856 920 IPR009057 -
Lele30g1163 1675 Pfam MEKHLA domain 673 827 IPR013978 -
Lele30g1163 1675 Pfam MEKHLA domain 1532 1674 IPR013978 -
Lele30g1163 1675 SMART START_1 162 357 IPR002913 GO:0008289
Lele30g1163 1675 SMART START_1 996 1206 IPR002913 GO:0008289
Lele30g1163 1675 ProSiteProfiles START domain profile. 987 1215 IPR002913 GO:0008289
Lele30g1163 1675 CDD START_ArGLABRA2_like 991 1207 - -
Lele30g1163 1675 Coils Coil 923 954 - -
Lele30g1163 1675 Pfam START domain 163 332 IPR002913 GO:0008289
Lele30g1163 1675 Pfam START domain 997 1205 IPR002913 GO:0008289
Lele30g1163 1675 SUPERFAMILY Homeodomain-like 22 86 IPR009057 -
Lele30g1163 1675 Gene3D - 850 924 - -
Lele30g1163 1675 Gene3D - 16 88 - -
Lele30g1163 1675 ProSiteProfiles 'Homeobox' domain profile. 19 83 IPR001356 GO:0003677
Lele30g1163 1675 SMART HOX_1 21 87 IPR001356 GO:0003677
Lele30g1163 1675 SMART HOX_1 855 921 IPR001356 GO:0003677
Lele30g1163 1675 SUPERFAMILY Bet v1-like 158 331 - -
Lele30g1163 1675 CDD bZIP 910 949 - -
Lele30g1163 1675 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 854 1675 IPR044830 GO:0003700
Lele30g1163 1675 CDD bZIP 76 115 - -
Lele30g1163 1675 Pfam Homeodomain 24 82 IPR001356 GO:0003677
Lele30g1163 1675 Pfam Homeodomain 858 916 IPR001356 GO:0003677
Lele30g1163 1675 FunFam Homeobox-leucine zipper protein REVOLUTA 858 913 - -
Lele30g1163 1675 CDD homeodomain 24 84 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g1163 Lele-ChrLele30 14553143 14566094 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g1163 1 827 Homeobox Transcription Factor Family AT5G60690 76.240 0.0 1333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lele30g1163 START 6.4e-48 CL0209
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele30g1163 30 14553143 14566094 Lele31g1304 31 19138846 19144677 hybridization
Lele30g1163 30 14553143 14566094 Lele32g0233 32 1398642 1404379 hybridization