Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g1153 ATGAAGCCCCAGCTCGAAATTGTTCTCTCTTTTGTAATTTGCATGATCTTGCTTCAATGCTCACTTTGTGATCAACAATCTGATACTTCTGGCCATAGCAAGTGGGAATGTAGATGTTCTTTCCAAGGGAACCAGGACTCCATTGCCAATTGTTCTGCGTCCTGTGATTGTCGTTCAGATGCGAAAGAGAGTGGATCTATATGGACGTGCATATGTGATCCCAACGGGTTTCCTAAAGTGGCGGCAGATGGCCATAGTCCTAATTGCTTTACAGCCTGCAACTGCACCTGGGGATCTCTCGCCATGTCACAAGGTTCAAAGAAACACATATCCAGCAAGATTATAATAATCGTTCTATTAGTATGTGTTTTATGTACAACTATTGCATTTCTTGCCTCGTTCACATGCTATGTCTGCTGGAAGGACCGGTGTCCTGTTCAACCGCCAATATTCTCATCAGATAAGGAAACAAGTTGCAATAGTACCACCAACTTAATTAGTAACAGGACTTCATCAGTGCTAGAAACAAAATTTGCCATAAATTCTCCCATTAATAATATTACAGGGTGCTTTAAGAAGGCCTCTTTCTTGTTTGGGAGCAGAACAGAGACTTTTCAAGGCAAAATTATTCAATTTTCATTTGCTGAATTGGAAAATGCGACTGAAAACTTTTCAGCTTCCAATCTTATTGGACTAGGGGGAAGTAGCTATGTATATCGTGGTCAGCTGAAAGATGGTAGTAATGTGGCAATTAAGCGACTAAAATCTCAAGGAGGTCCTGAAGCCGACTCTGTATTTTTGACAGAGATTGAGCTATTATCTAGACTCCATCATTGCCATCTTGTGCCTTTACTTGGATACTGTTCAGAACTGAAAGGGAAACATGTTGAAAGGCTGCTAGTATTTGAGTACATGGCCAATGGAAATTTGAGGGACTGTTTGGATGGAGTTTCTGGAGAAATTATGGATTGGGCTACTCGGATTACAATTGCAATGGGAACTGCAAGAGGCTTGGAATATCTCCATGAGGCAGCAGCTCCAAGAATTCTGCACAGAGATGTCAAATCAACTAATATTCTTCTGGATGAAAATTGGCAGGCAAAAATAACTGACCTCGGTATGGCTAAAAACTTGAGAGTTGATGAACCCCCAAGCTGTTCAAATTCCCCAGCAAGAATGCAGGGGACGTTTGGCTATTTTGCCCCTGAGTATGCAATATTTGGAAGAGCCTCTCCCAAGTCGGATGTCTTCAGTTTTGGTGTGGTTCTTCTTGAGCTTATGAGTGGTCGGCAACCTATCCATAAATCCACAGGCAAACAAGAGAGCCTCGTCATATGGGCTACCCCTCGCTTGCAAGATAGCAAGCGAGTAATAACCGAGGTGGCTGACCCTCATTTGAATGGGAACTTTCCTGAGGAGGAAGTGCAGATAATGGCATATTTATCAAAGGAGTGTTTGCTGCTGGATCCTGATGCTAGGCCTACCATGAGTGAAGTTGTTCAAATTCTTTCAACAATATCACGTGATAAATCTAGGAGAAGAATCAACATTCCAGTCAGCCTTTTTCAGGAACCTCAGGATGCAGAAAATCAAATGCAAGCTCCGTCTAGTGAATCTCCGGGTCAAGATTCATTGGCATTAGGTATTAACCACAATATGATTGTTGGGAACAAAAATGAAGAAGTAGAAACAGTTTCATCTGAGTATATGGAGAGTTTGATCCTCTTGACTTCTAAAAAAGAGGGTTTGCATGGATCGGATGATGAAACCGTAGACCTAACTGAGCCTCGGTTCGAATCATTTTGCCTGACAAACAGCAATTCTCCTTGA 1830 0.4208 MKPQLEIVLSFVICMILLQCSLCDQQSDTSGHSKWECRCSFQGNQDSIANCSASCDCRSDAKESGSIWTCICDPNGFPKVAADGHSPNCFTACNCTWGSLAMSQGSKKHISSKIIIIVLLVCVLCTTIAFLASFTCYVCWKDRCPVQPPIFSSDKETSCNSTTNLISNRTSSVLETKFAINSPINNITGCFKKASFLFGSRTETFQGKIIQFSFAELENATENFSASNLIGLGGSSYVYRGQLKDGSNVAIKRLKSQGGPEADSVFLTEIELLSRLHHCHLVPLLGYCSELKGKHVERLLVFEYMANGNLRDCLDGVSGEIMDWATRITIAMGTARGLEYLHEAAAPRILHRDVKSTNILLDENWQAKITDLGMAKNLRVDEPPSCSNSPARMQGTFGYFAPEYAIFGRASPKSDVFSFGVVLLELMSGRQPIHKSTGKQESLVIWATPRLQDSKRVITEVADPHLNGNFPEEEVQIMAYLSKECLLLDPDARPTMSEVVQILSTISRDKSRRRINIPVSLFQEPQDAENQMQAPSSESPGQDSLALGINHNMIVGNKNEEVETVSSEYMESLILLTSKKEGLHGSDDETVDLTEPRFESFCLTNSNSP 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g1153 609 Pfam Protein kinase domain 226 501 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele30g1153 609 Gene3D Phosphorylase Kinase; domain 1 199 304 - -
Lele30g1153 609 SUPERFAMILY Protein kinase-like (PK-like) 205 503 IPR011009 -
Lele30g1153 609 MobiDBLite consensus disorder prediction 523 545 - -
Lele30g1153 609 Gene3D Transferase(Phosphotransferase) domain 1 305 521 - -
Lele30g1153 609 SMART serkin_6 224 506 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele30g1153 609 ProSitePatterns Protein kinases ATP-binding region signature. 230 252 IPR017441 GO:0005524
Lele30g1153 609 ProSiteProfiles Protein kinase domain profile. 224 506 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele30g1153 609 MobiDBLite consensus disorder prediction 520 545 - -
Lele30g1153 609 PANTHER OS01G0750732 PROTEIN 27 526 - -
Lele30g1153 609 ProSitePatterns Serine/Threonine protein kinases active-site signature. 349 361 IPR008271 GO:0004672|GO:0006468
Lele30g1153 609 FunFam receptor-like serine/threonine-protein kinase NCRK 305 515 - -
Lele30g1153 609 FunFam receptor-like serine/threonine-protein kinase NCRK 198 304 - -
Lele30g1153 609 CDD STKc_IRAK 230 503 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g1153 Lele-ChrLele30 14457216 14460696 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g1153 1 605 Receptor kinase-like Gene Family AT2G28250 53.997 0.0 590
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XVI Lele30g1153 Pkinase 1.3e-44 CL0016