Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g1151 ATGTTGGGGCGCGGCAGCGATCATGGCGTTGTTTTAATGGCGGAAAACGACGAGAGGACGAAGGCGAATAAGGCAGACCCGTTGAAGTGGGGGGAAGCGGCGGAGTTGACTAGGGGGAGCCACTTGGAGGAAGTGAAGGCCATGGTGAGGGATTACAGGAGGAAGGTGGTGAGGGTGGGAGGGGAGTCGCTGACGGTGGGGCAGGTGGCAACGGTGGCGGAGGCGAGGTCGAGGGTGGAGCTGGAGGAGAGGAAGAGGGAGGGAGTGGAGGCGAGCAGCGCGTGGGTGATTGAGAGCGTGAAGAAAGGGATGGACAGTTATGGAGTGACGACGGGGTTCGGTGCCACGTCGCACAGGAGAACCGGCCGAGGGGTGGCGCTGCAAGCTGAGCTCATAAGGTTTTTGAATGCGGGAATATTTGGGAATGGAACAGAAGCTTGCAATACCCTGCCGGCGAGTGCATCAAGAGCGGCAATGTTGGTCAGAATCAACACCCTCCTCCAAGGTTACTCCGGCATCAGATATAACATACTTGAAGCCATTGCAAAACTCCTTAACCACAGCATTACTCCATGCTTGCCCTTGCGCGGTTCCATTTCAGCCTCCGGGGACTTAGTCCCATTTTCATACCTTGCCGGACTGTTGACCGGAAGGCCAAATTCAAAAGCCATTGGCCCCAACAGCGAGTCCCTAAGTCCGTCGGAAGCCTTCCGTCTAGCTTCTATCCATGAGGGTTTCTTTGAGTTGCAGCCAAAGGAGGGCCTTGCACTTGTTAATGGAACTGGGGTTGGAGCTGGTTTGGCTTCTATGGTTCTTTTTGAGGCCAACATTTTAACCGTTCTTTCTGAAGTCATGTCCGCAATTTTTGCTGAAGTAATGCACGGGAAACCAGAGTTTACAGACCATTTGACACACAGATTAAAACATCATCCTGGACAGATCGAAGCAGCAGCAATAATGGAACACATCTTAGATGGAAGTGCTTATGTTAAAGCAGCGAAAAAGTTGCACGAGATTGATCCATTTCAAAAGCCTAAGCAAGATAGGTATGCTCTTAGAACTTCACCTCAATGGCTAGGTCCTCAGATTGAAGTTATCAGATCATCAACAAAATCCATTGAGAGGGAGATCAACTCTGTAAATGATAACCCTTTGATTGATGTATCGAGGAACAAAGCTCTTCATGGTGGCAATTTTCAGGGCACACCAGTTGGTGTTTCCATGGACAACACAAGACTAGCTTTGGCTGCCATTGGGAAGCTCCTTTTTGCTCAAATGTCTGAGCTGGTTAATGATTTTTACAACAATGGCTTGCCTTCAAATCTTTCTGGGGGACGTTTTCCAGGCTTGGATTATGGATTCAAGGGTGGCGAAATAGCAATGGCTTCATATTGTTCTGAGCTTCAGTACCTGGGAAACCCAGTCACTAATCACGTCCAAAGTGCAGAACAGCACAATCAAGATGTGAACTCATTAGGATTAATCTCTGCAAGGAAAACAGCTGAAGCAGTTGAGATATTGAAGCTAATGACTTCAACTTACTTGATTGCTCTCTGTCAAGCCATAGATTTGAGGCATTTGGAGGAGAACTTGAAGAACACGGTTAAGAATACAGTGAGCCTAGTGGCTAAGAAGGTCCTAACCGTGGGTGCTAATGGAGAGCTTCGTCCTTCAAGATTCTGTGAGAAAGATTTGCTCAAGGTGGTTGATCGGGAACATGTTTTTGGATATATTGATGATCCGTGCAATGCTACTTACCCTCTGATGGAAAAGCTAAGGCGTGTGCTTGTGGAACATGCGTTGATGATGAGTAATGGTGGTTTGGAAAGTGGATATGCTTCAATATTCCTCAAGATCGTTGCCTTTGAAGAGGAACTGAAAGCAGTGTTGCCCAATGAAATTGAATCTGCAAGAAATGCCTTTGAGAAGGGCATTTCAGCAATCCCTAACAAGATTAAAGATTGCAGGTCGTATCCACTTTACAAGTTTGTAAGGGAGGAGTTGGGCACACAGTTTCTAACCGGAGACAAAAGTCGGTCCCCAGGAGAAGATTTTGATAAAGTTTTCACTGCAATTAGTGAAGGGAAGTTGATTGATCCCATGTTTGAATGCTTAAAGGATTGGGATGGTGCACCTCTTCCAATATGTTAA 2151 0.4723 MLGRGSDHGVVLMAENDERTKANKADPLKWGEAAELTRGSHLEEVKAMVRDYRRKVVRVGGESLTVGQVATVAEARSRVELEERKREGVEASSAWVIESVKKGMDSYGVTTGFGATSHRRTGRGVALQAELIRFLNAGIFGNGTEACNTLPASASRAAMLVRINTLLQGYSGIRYNILEAIAKLLNHSITPCLPLRGSISASGDLVPFSYLAGLLTGRPNSKAIGPNSESLSPSEAFRLASIHEGFFELQPKEGLALVNGTGVGAGLASMVLFEANILTVLSEVMSAIFAEVMHGKPEFTDHLTHRLKHHPGQIEAAAIMEHILDGSAYVKAAKKLHEIDPFQKPKQDRYALRTSPQWLGPQIEVIRSSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPVGVSMDNTRLALAAIGKLLFAQMSELVNDFYNNGLPSNLSGGRFPGLDYGFKGGEIAMASYCSELQYLGNPVTNHVQSAEQHNQDVNSLGLISARKTAEAVEILKLMTSTYLIALCQAIDLRHLEENLKNTVKNTVSLVAKKVLTVGANGELRPSRFCEKDLLKVVDREHVFGYIDDPCNATYPLMEKLRRVLVEHALMMSNGGLESGYASIFLKIVAFEEELKAVLPNEIESARNAFEKGISAIPNKIKDCRSYPLYKFVREELGTQFLTGDKSRSPGEDFDKVFTAISEGKLIDPMFECLKDWDGAPLPIC 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g1151 716 FunFam Phenylalanine ammonia-lyase 262 554 - -
Lele30g1151 716 CDD PAL-HAL 62 525 IPR001106 -
Lele30g1151 716 TIGRFAM phe_am_lyase: phenylalanine ammonia-lyase 26 706 IPR005922 GO:0005737|GO:0006559|GO:0016841
Lele30g1151 716 FunFam Phenylalanine ammonia-lyase 17 261 - -
Lele30g1151 716 FunFam Phenylalanine ammonia-lyase 528 650 - -
Lele30g1151 716 Pfam Aromatic amino acid lyase 64 537 IPR001106 -
Lele30g1151 716 PANTHER HISTIDINE AMMONIA-LYASE 22 716 IPR001106 -
Lele30g1151 716 Gene3D Fumarase/aspartase (Central domain) 263 710 - -
Lele30g1151 716 Coils Coil 72 92 - -
Lele30g1151 716 Gene3D - 528 650 IPR023144 -
Lele30g1151 716 SUPERFAMILY L-aspartase-like 26 716 IPR008948 GO:0003824
Lele30g1151 716 Gene3D - 17 261 IPR024083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g1151 Lele-ChrLele30 14436525 14438812 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g1151 20 716 Monolignol Biosynthesis Gene Families AT3G53260 76.000 0.0 1125