Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g1147 ATGGAGAAAGCTGCTGCCACACGACTCTTGATTTGCAGTTTATTCGCTGTACTTTGTTTGCTCTCTTGCCCAGCAACTTGTTCAGAAGTCGAGGATGAAAGTGAGTTTAGTTACGACGAAGATTCAGACACAGGACCATCTCGATGGGGACATATCAAACCAGAATGGATACTGTGCAAAACTGGAAGAATGCAATCACCCATTGATTTGATCAATAAAAGGGTTCAAGTTGTCTCGGATTTAGGGCCCCTCCAGCAGAAGTATCACCCTTCCAATGCCACTCTTAAAAATAGAGGCCATGATATCAAGTTGGAATGGGCTGCAGGCGCAGGCTATCTTCAAATCAACAAAACTCAGTATGTTCTGATACAATGCCACTGGCATTCTTTCTCAGAACATACCATCGATGGCAAAAGATTTGATCTAGAGTTACATATGGTGCACCAAACGGAAAAAGGAGAAATAGCCGTAATTGGGATATTGTACAAAATTGGCAAACCAGATCCTTTCTTGTCATCGTTGATGGATGAGTTGAGGGCCATATCTGATACGCCTAAAGCAGAAGAAAACGCGGGAATAGTTGATCCATGGCTGATTAAACCAAGTAGCAAGAGTTATTACAGATACATGGGTTCTCTCACCACACCTGATTGTGCTGAAAACGTTGTTTGGACCATCCTTTATGATGAGCACGTGAGAACTGTTTCAAAACGGCAAGTCGAGATGCTTCGAGATGCTGTTAATGACGATTCAGAGAATAACGCTAGACCACTGCAGCCCATAAACAACCGTTTGGTGCAATTCTATCAACCAAAGGGTTCTAAAAATGATTGA 834 0.4257 MEKAAATRLLICSLFAVLCLLSCPATCSEVEDESEFSYDEDSDTGPSRWGHIKPEWILCKTGRMQSPIDLINKRVQVVSDLGPLQQKYHPSNATLKNRGHDIKLEWAAGAGYLQINKTQYVLIQCHWHSFSEHTIDGKRFDLELHMVHQTEKGEIAVIGILYKIGKPDPFLSSLMDELRAISDTPKAEENAGIVDPWLIKPSSKSYYRYMGSLTTPDCAENVVWTILYDEHVRTVSKRQVEMLRDAVNDDSENNARPLQPINNRLVQFYQPKGSKND 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g1147 277 CDD alpha_CA_prokaryotic_like 45 268 IPR041891 -
Lele30g1147 277 ProSiteProfiles Alpha-carbonic anhydrases profile. 34 270 IPR001148 -
Lele30g1147 277 PANTHER CARBONIC ANHYDRASE 33 264 IPR023561 GO:0004089|GO:0008270
Lele30g1147 277 ProSitePatterns Alpha-carbonic anhydrases signature. 131 147 IPR018338 GO:0004089|GO:0008270
Lele30g1147 277 SUPERFAMILY Carbonic anhydrase 35 266 IPR036398 -
Lele30g1147 277 SMART Carb_anhydrase_2a 38 268 IPR001148 -
Lele30g1147 277 Pfam Eukaryotic-type carbonic anhydrase 45 268 IPR001148 -
Lele30g1147 277 FunFam Alpha carbonic anhydrase 3 33 273 - -
Lele30g1147 277 Gene3D Alpha carbonic anhydrase 32 276 IPR036398 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g1147 Lele-ChrLele30 14414315 14417050 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele30g1147 30 14414315 14417050 Lele09g1150 09 20590385 20592194 CCT
Lele30g1147 30 14414315 14417050 Lele10g1120 10 22568375 22569455 CCT
Lele30g1147 30 14414315 14417050 Lele11g1151 11 18779524 18781333 CCT
Lele30g1147 30 14414315 14417050 Lele31g1284 31 18980791 18984562 hybridization
Lele30g1147 30 14414315 14417050 Lele32g0251 32 1549320 1554754 hybridization