Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g1145 ATGAGCAACAGAAGGCCGGAACCGCATGTAGCGCAACAAATTCGGCGTGACAGGTTGAGAATCCAGAATGGCTCCCAGCATCATTTTGAAGATTTCGAAAGCAATCTTGATCAATTATCTTTACGTCCAGGGATCAGTTCTGATCTTCTTCAAGTCAAGAGTAGTGTGAGGAATGCCAATATGCTTTACGAACCTGTTTTTTATTCATCGTCGGAGATGGTCAATTTTTCAACGGATTCGAATCATTTAGCTGAATCCAGTAGTAGGCTGATGACGATGCCTCAGTTTGCTCCATTCCCCTTTTCATCAAACCCCGTTTCCTCCAGCTTTCATTCTTCTCTCGTAGAGCAACGCGAAGCACGTAACTTAGGCTATTGGATGCCTAACTATGCATCTAGTTCGGCGACTAACGAAAGCAATCCTAATCCTAATTCCAGTTTTGGCGTGGAATTCAATAATGAACTCACTGGTGTGCAGTCTTCTTCTCTGAACAATCCATCGTGTGAAACGGCGGTGACCCGAGAAAGCCAAAGGCTATTAGGCGAGATTCATCCGAACGTTATGCAGGATATAATCAAGTCAGCTTCTATCAGTGGGCAAGGGTCAGAAATGGCTTCATTGACTCAACAAACAGGCCACGGAATGTGGGTGGGAAACAGAAATCAACTGTTTTTTCTTCCAAACTATGGAATCCAATCAAATCAGTTGCGTCTTGGAAATCCTAAGTCTTGCACTGACCGAACGATGGAACGTTGTGAAGCTAGTGATGAATGCTCGGGTCGTCGAGTGAGCGACTCCAATAATCAGGGCTTATCTTTATCACTTTCGTCGAATTCACAGTCTGCGCCTTGCAGATCGGGTGACCACCAATCGCGACTTGTCCTTTCTAAGGATCCCCAATACTCAAAACCTTTAAGATCTGCTGCAAATCTCTCTTCTGGAGACCGTGTCAAATCGCTTCAAAACATGGTGGTGGGTATACCTTCTTCAAACATTGATTATCGAAATGTGGGGCCTCTCGGCCCTTTCACGGGTTATGCTACCATATTGAAGAATTCGAGTTTCTTAAAGCCAGCGCAAGAGTTGTTAGAAGAAATCTGTGGTCAACCCAACGAAAAGCTTACAAAAGGACCTGACGCTTCTGGGAGGGTTTCTGGAGAAGTTGGTGCTGCTTCTACTTCTGCTGATGTTGTCAATGGAACAAATGAAAGTGGTGTTAGCGCGAAGAATAGCAGTTCCGGTGCTTCGTTCTCCATGCTTCGTTGTTCTAATGGAAATGAAATTAGTGGTGATGGTGGAACAAGGAGTAGCTCTCGCCCTTCTTCTCGGCCAGAGTATCAACAAAGATTGGCTAAGTTCCTGTACATGCAAGAGGAGGTTATCAGAAGATACAAGCAACATCAGCAGCAAATGCAAATGGTTATCCCATCCTTTGAGTCAGTCGCAGGTCTCAGTTCTGCTACTCCTTACGTTTCCAAGGCTCTCAAGTCAGTATCCAGCCACTTCAGATGCCTAGAAAATGCTATCTCCGATCAAGTTAAGCATATAAGAGAAGCCTTTGGAGAGGAATTATCAGCATCTACCAGTGGTGGTGTTACTTCCACCAGTGGAAAACTTGACAGCAATATTGCGCGACTGAAGTTCTTGGATCAAAGCTTTCAAAAGAACAAATTCGTTGTGGGTGCTACAGGCTATGTTGAACAGCAACAGCCTGCGTGGAGGCCCCAGCAGAAAGGCTTACCAGAACGTGCGGTGTCAGTTCTTAGAGCTTGGTTGTTTGATCATTTTCTTCACCCGTACCCCACGGACGCTGATAAACACGTGCTAGCTGCTCGAACAGGTCTATCTCGAAACCAGGTATCAAACTGGTTCATAAACGCGCGAGTACGTGTTTGGAAGCCAATGGTAGAGGAAATACACATGCTTGAAACGAAAGGGCTGACGAGTGAGAAAGACGTCGCCGAGAACGGTTGTAAACACGAGGGAGCTTGTGCCATTGAAGGTTCCCATCAACCTTTGTTGCAGGAGGAGGAGGTGGTGGAATTAAATGCACAAGAATGGAACCAAGAGAAGCGATCGAAGCTTGAACGTCACATGGATGGTACATTAATGGGTTTTGTTCCGTACAGAAGGGGTGAAGTGGAGGTTGGGGGAGTTGGACCCGTTTCACTAACGTTGGCCCTCAAACATGGCGACGTTGAAGCAATTCAGCAACACCACCAACACCAACTTAGCCGCCACTTTGGAGGGCATCATGTCATCAATGATTTTGTTGGCTAA 2280 0.4592 MSNRRPEPHVAQQIRRDRLRIQNGSQHHFEDFESNLDQLSLRPGISSDLLQVKSSVRNANMLYEPVFYSSSEMVNFSTDSNHLAESSSRLMTMPQFAPFPFSSNPVSSSFHSSLVEQREARNLGYWMPNYASSSATNESNPNPNSSFGVEFNNELTGVQSSSLNNPSCETAVTRESQRLLGEIHPNVMQDIIKSASISGQGSEMASLTQQTGHGMWVGNRNQLFFLPNYGIQSNQLRLGNPKSCTDRTMERCEASDECSGRRVSDSNNQGLSLSLSSNSQSAPCRSGDHQSRLVLSKDPQYSKPLRSAANLSSGDRVKSLQNMVVGIPSSNIDYRNVGPLGPFTGYATILKNSSFLKPAQELLEEICGQPNEKLTKGPDASGRVSGEVGAASTSADVVNGTNESGVSAKNSSSGASFSMLRCSNGNEISGDGGTRSSSRPSSRPEYQQRLAKFLYMQEEVIRRYKQHQQQMQMVIPSFESVAGLSSATPYVSKALKSVSSHFRCLENAISDQVKHIREAFGEELSASTSGGVTSTSGKLDSNIARLKFLDQSFQKNKFVVGATGYVEQQQPAWRPQQKGLPERAVSVLRAWLFDHFLHPYPTDADKHVLAARTGLSRNQVSNWFINARVRVWKPMVEEIHMLETKGLTSEKDVAENGCKHEGACAIEGSHQPLLQEEEVVELNAQEWNQEKRSKLERHMDGTLMGFVPYRRGEVEVGGVGPVSLTLALKHGDVEAIQQHHQHQLSRHFGGHHVINDFVG 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g1145 759 CDD homeodomain 580 635 IPR001356 GO:0003677
Lele30g1145 759 Pfam Homeobox KN domain 591 630 IPR008422 GO:0003677|GO:0006355
Lele30g1145 759 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 251 651 - -
Lele30g1145 759 SMART HOX_1 574 638 IPR001356 GO:0003677
Lele30g1145 759 SUPERFAMILY Homeodomain-like 580 640 IPR009057 -
Lele30g1145 759 MobiDBLite consensus disorder prediction 261 313 - -
Lele30g1145 759 ProSiteProfiles 'Homeobox' domain profile. 593 634 IPR001356 GO:0003677
Lele30g1145 759 Pfam Associated with HOX 349 510 IPR006563 -
Lele30g1145 759 MobiDBLite consensus disorder prediction 392 415 - -
Lele30g1145 759 MobiDBLite consensus disorder prediction 253 313 - -
Lele30g1145 759 Gene3D - 577 639 - -
Lele30g1145 759 MobiDBLite consensus disorder prediction 372 415 - -
Lele30g1145 759 SMART prehox3 344 511 IPR006563 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g1145 Lele-ChrLele30 14393635 14396807 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g1145 441 730 Homeobox Transcription Factor Family AT4G34610 43.144 4.61e-63 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Lele30g1145 POX 2.4e-34 No_clan