Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g1143 ATGGCCGTCGACGCTTCCACCCCTCGGAACTCTCGCACCCCTAAATCAAGAACGGCATCATCTTCCAGACCCAACTTACCCGCCGCCGCCGCCTCTGCTTCCTACCACCCATCCTCTTCTTATACCAGCTCTGCTGCTTACTATGGCTCCTCCGGTTTCAGACTCACCTCCGACACCTCTATTTCGAGCGGAAGCTCTCTCTCTAGTTTTCGAGACAGCCTCCCTGAAAACCCCCACATCTATGACTTCTCTGAAATTTGCTCCGCCACCAACAATTTCCTTGCCAAGCGTTATTCCTCCTCCTCTTCTACTCCATCTTGGCGATGTACTCTCCGAGGCAGAGATGTCATTGTTTTCCAGCGCAAGTTCCGTCGCAAACTTCAGGTGAATCAACTCAGAGAACGCCTCTCTGTGATAGGCCGTAGCCACCACGTCAGCATCATCAAGCTCGTCGGTGCTTGCATCTCTGGCAACCATATCTACCTCGTGTACGACTTCGTGAATGGGGCCAACCTCTCCGATTGTTTGCGAAATACGAAGAACCTCAACTTCACGATCCTGTCCAGTTGGATTTCCAGAATGCAGGTTGCTACAGATCTCGCCGAGGGGTTTGATTACGTTCACAACAAAACCGGTTTAACCCTAAACTTCGTGCACAATCACATCAAGAGCAGTGCGATAATCGTGACAGAACCTTCGTTCAACGCCAGGATTTCACACTTCGGCGCCGCCCAGCTGTGCGGCGAGATCAACGAAGAGAGTGAAAATGCGAAACAGATGGAAGAGATTCCAGAGGAGCCATCTTCCTCCCCATCTTCGCCGAAATCAAAAGACGTAAGACGATCGAGAAGCTCTAACACGCAGTTCGAGGGCGTAAGAGGGTACATGGCACCGGAATACCAATCCACCGGCGCGGCGACCCAGAAGTCCGATGTGTACGCTTTTGGGGTGGTGATCTTGGAGTTGTTATCGGGAGACGAACCGTTGAAGTTCAAATACGATAAGAAGACCGGTGAGGTCGTGACCAACTCGGTGATCGATGCGGCGAGGGCCGTTCTGGACGGTGATACCAACGGCGGAGGTGGCGTGGAAGGGAGGCTGAGGAGATGGATGGACCGGAGGCTGAAGGACTCGTTCCCGGTGGAGGTGGCAGAGGAGGTGACACGTGTAGCACTTGAATGCGTACACGTTGATCCAGATAAGAGGCCCAACATGGGACGCGTCGCAGGAAAAATCTCGCGGCTATATCTTAAGTCTAGGATTTGGTCCGATAACATGAGAACGCCCACTGATATTCTTTCAGCCTCATTCGCTCCTCGATGA 1323 0.5276 MAVDASTPRNSRTPKSRTASSSRPNLPAAAASASYHPSSSYTSSAAYYGSSGFRLTSDTSISSGSSLSSFRDSLPENPHIYDFSEICSATNNFLAKRYSSSSSTPSWRCTLRGRDVIVFQRKFRRKLQVNQLRERLSVIGRSHHVSIIKLVGACISGNHIYLVYDFVNGANLSDCLRNTKNLNFTILSSWISRMQVATDLAEGFDYVHNKTGLTLNFVHNHIKSSAIIVTEPSFNARISHFGAAQLCGEINEESENAKQMEEIPEEPSSSPSSPKSKDVRRSRSSNTQFEGVRGYMAPEYQSTGAATQKSDVYAFGVVILELLSGDEPLKFKYDKKTGEVVTNSVIDAARAVLDGDTNGGGGVEGRLRRWMDRRLKDSFPVEVAEEVTRVALECVHVDPDKRPNMGRVAGKISRLYLKSRIWSDNMRTPTDILSASFAPR 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g1143 440 MobiDBLite consensus disorder prediction 1 40 - -
Lele30g1143 440 PANTHER OS09G0572100 PROTEIN 2 440 - -
Lele30g1143 440 Gene3D Transferase(Phosphotransferase) domain 1 168 429 - -
Lele30g1143 440 Coils Coil 243 263 - -
Lele30g1143 440 Pfam Protein kinase domain 126 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele30g1143 440 Gene3D Phosphorylase Kinase; domain 1 56 166 - -
Lele30g1143 440 ProSiteProfiles Protein kinase domain profile. 55 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele30g1143 440 SUPERFAMILY Protein kinase-like (PK-like) 107 408 IPR011009 -
Lele30g1143 440 MobiDBLite consensus disorder prediction 254 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g1143 Lele-ChrLele30 14377309 14378631 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g1143 76 426 Receptor kinase-like Gene Family AT2G33580 29.178 2.01e-36 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Lele30g1143 Pkinase 5e-24 CL0016